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SCN18_25_8_15_R2_B_scaffold_2123

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2123_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
50S ribosomal protein L11 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1G9_BREDI
rplK; 50S ribosomal protein L11
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCN18_25_8_15_R2_B_scaffold_2123_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(375..950)
DNA (576bp) protein (192aa)
Transcription termination/antitermination protein NusG n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE29_BREDI
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
NusG antitermination factor
SCN18_25_8_15_R2_B_scaffold_2123_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(964..1263)
DNA (300bp) protein (100aa)
Protein translocase subunit SecE n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H1_BREDI
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
preprotein translocase subunit SecE
SCN18_25_8_15_R2_B_scaffold_2123_trna_1
unknown

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comp(1337..1409)
DNA (73bp)
transferRNA Trp
SCN18_25_8_15_R2_B_scaffold_2123_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1548..2078)
DNA (531bp) protein (177aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H2_BREDI
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EGF95044.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
SCN18_25_8_15_R2_B_scaffold_2123_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2095..2607
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD79_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25933.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_2123_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2667..3407
DNA (741bp) protein (247aa)
Putative transcriptional activatory protein AadR n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDB3_BREDI
Putative transcriptional activatory protein AadR {ECO:0000313|EMBL:EKY25931.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
anr; Transcriptional activator protein Anr
SCN18_25_8_15_R2_B_scaffold_2123_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3473..4141)
DNA (669bp) protein (223aa)
OmpW family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE24_BREDI
OmpW family protein {ECO:0000313|EMBL:EKY25930.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
OmpW family protein
SCN18_25_8_15_R2_B_scaffold_2123_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4334..4453)
DNA (120bp) protein (40aa)
Cyd operon protein YbgT n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD81_BREDI
Cyd operon protein YbgT {ECO:0000313|EMBL:EKY25929.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cyd operon protein YbgT
SCN18_25_8_15_R2_B_scaffold_2123_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4476..5624)
DNA (1149bp) protein (383aa)
cydB; cytochrome bd-type quinol oxidase, subunit 2 cydB (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD74_BREDI
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EKY25928.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_2123_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5649..7217)
DNA (1569bp) protein (523aa)
Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEA8_BREDI
Cytochrome D ubiquinol oxidase, subunit I {ECO:0000313|EMBL:EKY25927.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cytochrome bd ubiquinol oxidase subunit I
SCN18_25_8_15_R2_B_scaffold_2123_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7455..9098
DNA (1644bp) protein (548aa)
Thiol reductant ABC exporter, CydD subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDA8_BREDI
Thiol reductant ABC exporter, CydD subunit {ECO:0000313|EMBL:EKY25926.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cysteine ABC transporter permease/ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_2123_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9095..10774
DNA (1680bp) protein (560aa)
Thiol reductant ABC exporter, CydC subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE21_BREDI
Thiol reductant ABC exporter, CydC subunit {ECO:0000313|EMBL:EKY25925.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cysteine ABC transporter permease/ATP-binding protein CydC
SCN18_25_8_15_R2_B_scaffold_2123_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10849..10965
DNA (117bp) protein (39aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I0_BREDI
Putative membrane protein {ECO:0000313|EMBL:EGF95052.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_2123_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10968..11339
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95053.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2123_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11364..12677)
DNA (1314bp) protein (438aa)
Transporter associated domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I2_BREDI
Transporter associated domain protein {ECO:0000313|EMBL:EGF95054.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2123_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12870..14465)
DNA (1596bp) protein (532aa)
MmoS n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I4_BREDI
MmoS {ECO:0000313|EMBL:EGF95056.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
multi-sensor hybrid histidine kinase
SCN18_25_8_15_R2_B_scaffold_2123_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14725..14871)
DNA (147bp) protein (49aa)
Elongation factor Tu n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=EFTU_CAUCR
translation elongation factor Tu
Uncharacterized protein {ECO:0000313|EMBL:ESQ83983.1}; Flags: Fragment;; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
Displaying 18 items

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