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SCN18_30_10_14_R5_P_scaffold_169

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Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_169_1
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..256)
DNA (255bp) protein (85aa)
atpA; F1 sector of membrane-bound ATP synthase, alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=2 Tax=Magnetospirillum gryphiswaldense RepID=Q6N0C5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257..820)
DNA (564bp) protein (188aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037522ED
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_3
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(997..3264)
DNA (2268bp) protein (756aa)
Helicase PriA n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H2R0_9PROT
priA; primosomal protein N' (replication factor Y)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3278..3934
DNA (657bp) protein (219aa)
transaldolase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B56C27
tal; transaldolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_5
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3952..4701
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIR7_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_6
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4709..5641
DNA (933bp) protein (311aa)
Tyrosine recombinase XerC n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIN5_9PROT
xerC; site-specific tyrosine recombinase XerC
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_7
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5647..6339
DNA (693bp) protein (231aa)
Aspartate racemase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122A8_POLSJ
aspartate racemase
Aspartate racemase {ECO:0000313|EMBL:ABE46634.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCN18_30_10_14_R5_P_scaffold_169_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6343..6759)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035FE264
N-acetyltransferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_9
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

comp(6756..8018)
DNA (1263bp) protein (421aa)
Amino acid permease-associated region n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQ19_AKKM8
amino acid permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8152..8676)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000376DAA9
Uncharacterized protein {ECO:0000313|EMBL:KJS37935.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
putative oxidoreductase
SCN18_30_10_14_R5_P_scaffold_169_11
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8693..9541)
DNA (849bp) protein (283aa)
Dienelactone hydrolase id=4969018 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_12
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9538..9966)
DNA (429bp) protein (143aa)
UPI0003D60668 related cluster n=1 Tax=unknown RepID=UPI0003D60668
Putative BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KGB57747.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
Rrf2 family transcriptional regulator
SCN18_30_10_14_R5_P_scaffold_169_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10009..10473
DNA (465bp) protein (155aa)
SEC-independent protein translocase protein TatC n=2 Tax=Sphingomonadaceae RepID=Q1N8D2_9SPHN
SEC-independent protein translocase protein TatC {ECO:0000313|EMBL:EAT07257.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_169_14
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10491..11189
DNA (699bp) protein (233aa)
UPI0003D5A07C related cluster n=1 Tax=unknown RepID=UPI0003D5A07C
Putative oxidoreductase {ECO:0000313|EMBL:GAO38315.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
alternative oxidase
SCN18_30_10_14_R5_P_scaffold_169_15
CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, Mobile_element

Not on your lists

11203..11481
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C618
Uncharacterized protein {ECO:0000313|EMBL:KHA63848.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_169_16
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

comp(11512..13263)
DNA (1752bp) protein (584aa)
Cation transporter protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU21_9RHIZ
Cation transporter protein {ECO:0000313|EMBL:EHK55781.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cation transporter
SCN18_30_10_14_R5_P_scaffold_169_17
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13471..13851
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F607BC
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13917..14423
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037388C4
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14420..15235
DNA (816bp) protein (272aa)
Putative transmembrane anti-sigma factor n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESD3_METSB
putative transmembrane anti-sigma factor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15198..15464)
DNA (267bp) protein (89aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15483..16895)
DNA (1413bp) protein (471aa)
dihydrolipoamide dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F76E18
dihydrolipoamide dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_22
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16906..18147)
DNA (1242bp) protein (414aa)
sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (EC:2.3.1.61)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPE8_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_23
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18201..21101)
DNA (2901bp) protein (967aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LUQ2_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_24
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21166..22041)
DNA (876bp) protein (292aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y444_9PROT
sucD1; succinyl-CoA synthetase subunit alpha
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_25
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22041..23237)
DNA (1197bp) protein (399aa)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A5L4_9PROT
succinyl-CoA synthetase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_26
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23430..24395)
DNA (966bp) protein (322aa)
mdh; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=MDH_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_27
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24483..25346)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JZK2_9SPHN
haloalkane dehalogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_28
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25351..26244)
DNA (894bp) protein (298aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNI9_ACIAC
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_29
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26314..27489)
DNA (1176bp) protein (392aa)
Putative ATPase, AFG1 family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3V4_AZOL4
putative ATPase, AFG1 family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_169_30
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27540..28502
DNA (963bp) protein (321aa)
fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZN8_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 134 in total

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