ggKbase home page

SCN18_30_10_14_R5_P_scaffold_202

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_202_1
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..5164
DNA (5163bp) protein (1721aa)
Outer membrane adhesin like proteiin n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QIS8_GLUHA
Uncharacterized protein {ECO:0000313|EMBL:EWY40912.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
outer membrane adhesin-like protein
SCN18_30_10_14_R5_P_scaffold_202_2
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5238..6818
DNA (1581bp) protein (527aa)
transporter n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237DC24
Outer membrane efflux protein {ECO:0000313|EMBL:EGG76815.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
Outer membrane efflux protein
SCN18_30_10_14_R5_P_scaffold_202_3
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6821..7615
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000381E089
Secretion protein HlyD {ECO:0000313|EMBL:KDU95527.1}; TaxID=1432055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter rhaeticus AF1.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_202_4
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7627..9030
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003623986
Uncharacterized protein {ECO:0000313|EMBL:GAO00051.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_202_5
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9027..11132
DNA (2106bp) protein (702aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000365159C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ01161.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_30_10_14_R5_P_scaffold_202_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11129..12013)
DNA (885bp) protein (295aa)
dapA2; 4-hydroxy-tetrahydrodipicolinate synthase 2 (EC:4.3.3.7)
dihydrodipicolinate synthase n=1 Tax=Streptomyces chartreusis RepID=UPI000262EE20
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12084..12986
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003638A08
LysR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13016..13252
DNA (237bp) protein (79aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13399..13959
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00035FC411
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACK49206.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_30_10_14_R5_P_scaffold_202_10
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13965..16301)
DNA (2337bp) protein (779aa)
Orn/Lys/Arg decarboxylase major region (EC:4.1.1.17)
Orn/Lys/Arg decarboxylase major region {ECO:0000313|EMBL:ACL55330.1}; EC=4.1.1.17 {ECO:0000313|EMBL:ACL55330.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Orn/Lys/Arg decarboxylase major region n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8I9S7_METNO
SCN18_30_10_14_R5_P_scaffold_202_11
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16315..17232)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JWY1_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ25089.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_30_10_14_R5_P_scaffold_202_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17308..18402)
DNA (1095bp) protein (365aa)
GTP-binding protein HflX n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I8G9_9BRAD
GTP-binding protein HflX {ECO:0000313|EMBL:ERF79770.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
nucleoside-diphosphate sugar epimerase
SCN18_30_10_14_R5_P_scaffold_202_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18468..19631)
DNA (1164bp) protein (388aa)
ferredoxin n=1 Tax=Sphingomonas elodea RepID=UPI00026308A2
hcaE; Rieske (2Fe-2S) domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19718..20839
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FF33_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX70617.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_202_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21089..22450)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEL1_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_16
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22454..25306)
DNA (2853bp) protein (951aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3V6_9PROT
conserved protein of unknown function, containing ATP-dependent Helicase domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_17
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25362..26456
DNA (1095bp) protein (365aa)
fatty acid hydroxylase n=1 Tax=Dyella ginsengisoli RepID=UPI000348B9FA
Sterol desaturase
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23667.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
SCN18_30_10_14_R5_P_scaffold_202_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26440..27618)
DNA (1179bp) protein (393aa)
Putative transmembrane MFS permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IV69_POLGS
transmembrane MFS permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_19
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27689..29290
DNA (1602bp) protein (534aa)
lysK; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5I0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29293..29952
DNA (660bp) protein (220aa)
Ureidoglycolate hydrolase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IQ44_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_21
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30041..31186
DNA (1146bp) protein (382aa)
Twin-arginine translocation pathway signal n=1 Tax=Ahrensia sp. R2A130 RepID=E0MNY2_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_22
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31183..31641
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0003137BE7
putative Bacterial regulatory protein, MarR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_23
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31598..32218)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A3276
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AKF03790.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
transcription regulator protein
SCN18_30_10_14_R5_P_scaffold_202_24
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32295..33248
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI0003616A29
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFB10687.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
dehydrogenase
SCN18_30_10_14_R5_P_scaffold_202_25
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33203..33856)
DNA (654bp) protein (218aa)
Transcriptional regulator, TetR family n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBT6_CAUCE
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_26
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33941..34828
DNA (888bp) protein (296aa)
Sterol desaturase-like protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4N9_9BURK
Sterol desaturase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_27
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34980..35189)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FY41_ACICJ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35286..35852
DNA (567bp) protein (189aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35924..36217
DNA (294bp) protein (98aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_202_30
unknown

Not on your lists

comp(36234..36353)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying items 1-30 of 110 in total

View Taxonomy