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SCN18_30_10_14_R5_P_scaffold_242

Search features with annotation key words

Displaying items 31-60 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_242_trna_1
unknown

Not on your lists

31000..31073
DNA (74bp)
transferRNA Met
SCN18_30_10_14_R5_P_scaffold_242_31
Candidatus Caedibacter acanthamoebae_SCNPILOT_EXPT_500_P_Alphaproteobacteria_novel_39_47, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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31146..32168
DNA (1023bp) protein (341aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
trxB; thioredoxin reductase (EC:1.8.1.9)
Ferredoxin--NADP reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IW45_RHOCS
SCN18_30_10_14_R5_P_scaffold_242_32
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32187..33656)
DNA (1470bp) protein (490aa)
Amidohydrolase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPM1_9PROT
Amidohydrolase {ECO:0000313|EMBL:EKE76497.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
amidohydrolase
SCN18_30_10_14_R5_P_scaffold_242_33
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33772..34728
DNA (957bp) protein (319aa)
dihydrodipicolinate synthetase n=1 Tax=Erwinia toletana RepID=UPI00035D6BDC
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:KGE00414.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
dihydrodipicolinate synthase
SCN18_30_10_14_R5_P_scaffold_242_34
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34733..36202
DNA (1470bp) protein (490aa)
dihydropyrimidinase (EC:3.5.2.2)
dihydropyrimidinase n=1 Tax=Herbaspirillum seropedicae RepID=UPI000306C0ED
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_35
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36216..37166
DNA (951bp) protein (317aa)
N-carbamoyl-D-amino-acid hydrolase (EC:3.5.1.77)
Nitrilase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GAA2_9BURK
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCN18_30_10_14_R5_P_scaffold_242_36
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37168..37794
DNA (627bp) protein (209aa)
Ferrous iron transporter A n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HII1_9BRAD
flavin oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_37
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37798..38472)
DNA (675bp) protein (225aa)
Hydantoin racemase (EC:5.1.99.-)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312053F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_38
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38559..39410
DNA (852bp) protein (284aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRY3_9PROT
amino acid ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_39
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39420..40163
DNA (744bp) protein (248aa)
ABC transporter n=1 Tax=Elioraea tepidiphila RepID=UPI000370DA3D
ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_40
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40163..40843
DNA (681bp) protein (227aa)
Putative glutamine ABC transporter permease protein GlnM n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A766_9PROT
amino acid ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_41
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40854..41519
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037456AC
polar amino acid ABC transporter inner membrane subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_42
Parcubacteria bacterium GW2011_GWB1_49_7, Parcubacteria, Bacteria

Not on your lists

comp(41516..41902)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B1V0_TURPD
Uncharacterized protein {ECO:0000313|EMBL:KKW09518.1}; TaxID=1618883 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_49_7.;"
Protein of unknown function DUF2091, periplasmic
SCN18_30_10_14_R5_P_scaffold_242_43
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41990..42958
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3I2_9RHIZ
Tricarboxylate transport protein TctC
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_44
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43022..43375
DNA (354bp) protein (118aa)
SCN18_30_10_14_R5_P_scaffold_242_45
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43407..43763)
DNA (357bp) protein (119aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_46
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43884..44198)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2SKF2_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_47
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44362..45915
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003796F91
amidohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_48
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45879..46214)
DNA (336bp) protein (112aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_49
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46282..46851)
DNA (570bp) protein (190aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z030_9RHIZ
NnrU family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_50
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46899..47195)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000382D560
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_51
unknown

Not on your lists

comp(47264..47653)
DNA (390bp) protein (130aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_242_52
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47819..48376
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6X0_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_53
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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comp(48410..48943)
DNA (534bp) protein (178aa)
Putative transmembrane protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HUP8_AZOC5
transmembrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_54
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48940..49509)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002E921CF
chromate transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_55
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49506..50456)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HUP2_AZOC5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_56
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50488..50799)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KQZ9_MICAA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_57
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50902..52113
DNA (1212bp) protein (404aa)
Aspartate aminotransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPK9_9PROT
aminotransferase, classes I and II
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_58
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52121..52894
DNA (774bp) protein (258aa)
ABC transporter, ATP-binding component n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YEY1_9PROT
ABC transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_242_59
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52891..53688
DNA (798bp) protein (266aa)
ABC-type multidrug transport system, permease component n=1 Tax=Oceanibaculum indicum P24 RepID=K2K223_9PROT
ABC-type multidrug transport system, permease component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 31-60 of 104 in total

View Taxonomy