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SCN18_30_10_14_R5_P_scaffold_547

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_547_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..831
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I8N3_9SPHN
(2Fe-2S)-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

848..3154
DNA (2307bp) protein (769aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2)
carbon-monoxide dehydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F27F86
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3182..3988)
DNA (807bp) protein (269aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4076..4456
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4561..4935
DNA (375bp) protein (125aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_6
unknown

Not on your lists

comp(4946..5311)
DNA (366bp) protein (122aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_547_7
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5308..6054)
DNA (747bp) protein (249aa)
Alpha/beta family hydrolase n=1 Tax=Achromobacter piechaudii HLE RepID=J4J713_9BURK
alpha/beta hydrolase fold family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCN18_30_10_14_R5_P_scaffold_547_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6074..7066)
DNA (993bp) protein (331aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036F9192
extra-cytoplasmic solute receptor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7079..8134)
DNA (1056bp) protein (352aa)
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminoglycoside phosphotransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8247..8501)
DNA (255bp) protein (85aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8545..8874)
DNA (330bp) protein (110aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8961..9551)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_005I08 RepID=B3T0I2_9ZZZZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_13
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9729..10112)
DNA (384bp) protein (128aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2I4_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_14
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10143..10982)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZC3_ALIDB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_15
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11178..12497)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003016028
putative nitrilotriacetate monooxygenase component A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12502..16083)
DNA (3582bp) protein (1194aa)
ABC transporter CydDC cysteine exporter family permease/ATP-binding protein CydC 1 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPZ1_9PROT
cydC1; ABC transporter CydDC cysteine exporter family permease/ATP-binding protein CydC 1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16155..17054
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TT40_9PROT
HTH-type transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17188..18411
DNA (1224bp) protein (408aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QHA7_RHOPT
ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_19
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18482..19567)
DNA (1086bp) protein (362aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CLT0_9BURK
ABC transporter ATPase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_20
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19612..20091)
DNA (480bp) protein (160aa)
Acetyltransferase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MN85_CORCM
acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_547_21
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20140..21288
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000360F038
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EKE77379.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Iron-containing alcohol dehydrogenase
SCN18_30_10_14_R5_P_scaffold_547_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21300..22079
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D2D00D
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC60426.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
dehydrogenase-like protein
SCN18_30_10_14_R5_P_scaffold_547_23
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22235..22999
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A702_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CPR21939.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_547_24
unknown

Not on your lists

23049..23348
DNA (300bp) protein (100aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_547_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23427..24152)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYR7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35482.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_547_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24149..24718)
DNA (570bp) protein (190aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P1Z6_9BRAD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS35481.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
sigma-70 region 2
SCN18_30_10_14_R5_P_scaffold_547_27
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24947..25726
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CI1_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE38208.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_30_10_14_R5_P_scaffold_547_28
unknown

Not on your lists

comp(25827..26381)
DNA (555bp) protein (185aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_547_trna_1
unknown

Not on your lists

comp(27248..27321)
DNA (74bp)
transferRNA Pro
SCN18_30_10_14_R5_P_scaffold_547_29
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27439..28263
DNA (825bp) protein (275aa)
aspartate dehydrogenase (EC:1.4.1.21)
L-aspartate dehydrogenase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B6BBE7
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 38 in total

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