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SCN18_30_10_14_R5_P_scaffold_202_32

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(38128..39558)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Pseudomonas mendocina RepID=UPI000363E890 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 467.0
  • Bit_score: 454
  • Evalue 9.00e-125
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 467.0
  • Bit_score: 453
  • Evalue 5.60e-125
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:AEB56840.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 467.0
  • Bit_score: 453
  • Evalue 2.80e-124

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGCGCCGCCCTGCCAAACGCCTCGTCTCCGCTCCCCTGGCGCGGTCCACGCTCCCGTTGCAGGAGCAGCTTTACCGGCGGATCCGGGCGGTCATCGCCACACGACAACTGACGCCCGGAGAGAAGCTACCGTCCGTCCGCACCCTGGCGAGCGAGCTGGGCGTCGCGCGCGGGACCGTGGACGCGACCTACGCTCGACTCGCCGGCGAGGGTTATCTCCTCTCGCGGGGACCGGCCGGAACGATCGTCTCGCCCGAGCTGCAAGTCGATGCCCTGCCGGCGCGCGCCGTGCGCGACACGCTGAAGCTGGCACCCGAGGAGGACTCGGGCGCCGAGCTGCGACCGTTCCAGTTGGGCCTGCCCGCCCTGGACGCGTTCCCACGCGCTCTTTGGGCGCGATTGACCGCTCGCGCCGCCAAGCGACTGAGCGGAGGCGCCCTCGGCTACCCCGCCTATGCCGGCTTGCCCGATCTTCGCGAGGCCATCGCGTCGTATCTCGCGGTCTCGCGCGGCGTGTTGTGCCACGCGACGCAGGTGGTCGTCACCGGCGGGTATCAGGATGCTCTCAGTCTGATGGCTCGCCTGCTCCTGCGGCCGGGCGACGGAGTGTGGTTCGAGGAGCCGGGATATTTCCTGGCGCGCCACGCTCTGGAAACGGCATCGGCCCAGGTGCTCCCCATCCCTGTCGACGATCAGGGACTGGACGTGGAGTTTGCGCAGGAGAAGGCGCCTCGTGCCCGGCTCGCCGTCGTGACGCCTGCCCATCAGAGCGTGCTCGGTGTCGCCCTCTCTCTGGCCCGCCGGCAGAAACTCCTGGCCTGGGCCAGCGAGACGAATGCCTGGATCGTCGAGGACGATTACGACGGCGAGTTCCACTATGTCGGCCGAAAGCTCCCGGCGCTGAAGAGCCTCGATCTCGCCGACCGCGTGATCTACGCCGGCAGCTTCAGCAAGACCCTCTTCCCCGGCCTCTGTCTTGGTTATCTCGTCCTGCCGCATTCCCTGATTCAGCAGGTCATCGAGGCGAAGCGCGCCACCGCCCATGGCGAACCTGTGCTGGGTCAGCGCGTCGTTGCCGACTTCCTTTCCGACGGACATTTCGGCCGCCATCTCAAGCGCATGCGCGGCCTCTACGCAGCACGGCGAGACGCCCTGGCTTCGGCGCTTCGCAACGCCTTCGGTGACCGGCTGGAGATGACCCTGCGGCCGGGTGGCATGCATCTGCTTGCCCGCTTTCCTGACGCGAAGGACGACGTCGACCTCGTCCGCCGCGCCCTTAGGCACCGTCTGCTCCCCAGCGCGCTTTCCGCCCAGTATCTCGGGCGGACGAACGACTCGGGCCTGATGCTGAGCTTCACCAACATCCCCGAGGAACAGGCCCTCTCGCGGGCAAAGGCCCTGGCGCGCGCCCTCGGGATGGGCGCGGGCTAG
PROTEIN sequence
Length: 477
MRRPAKRLVSAPLARSTLPLQEQLYRRIRAVIATRQLTPGEKLPSVRTLASELGVARGTVDATYARLAGEGYLLSRGPAGTIVSPELQVDALPARAVRDTLKLAPEEDSGAELRPFQLGLPALDAFPRALWARLTARAAKRLSGGALGYPAYAGLPDLREAIASYLAVSRGVLCHATQVVVTGGYQDALSLMARLLLRPGDGVWFEEPGYFLARHALETASAQVLPIPVDDQGLDVEFAQEKAPRARLAVVTPAHQSVLGVALSLARRQKLLAWASETNAWIVEDDYDGEFHYVGRKLPALKSLDLADRVIYAGSFSKTLFPGLCLGYLVLPHSLIQQVIEAKRATAHGEPVLGQRVVADFLSDGHFGRHLKRMRGLYAARRDALASALRNAFGDRLEMTLRPGGMHLLARFPDAKDDVDLVRRALRHRLLPSALSAQYLGRTNDSGLMLSFTNIPEEQALSRAKALARALGMGAG*