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SCN18_30_10_14_R5_P_scaffold_101

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Displaying items 1-30 of 196 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_101_1
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17..769)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJZ7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70969.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_101_2
unknown

Not on your lists

comp(1390..1518)
DNA (129bp) protein (43aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_101_3
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2691..4037)
DNA (1347bp) protein (449aa)
HipA-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUK0_9BURK
HipA-like protein {ECO:0000313|EMBL:EIK92890.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
HipA-like protein
SCN18_30_10_14_R5_P_scaffold_101_4
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4041..4325)
DNA (285bp) protein (95aa)
Putative DNA-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUK1_9BURK
Putative DNA-binding protein {ECO:0000313|EMBL:EIK92891.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative DNA-binding protein
SCN18_30_10_14_R5_P_scaffold_101_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4516..4983
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A620_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA85898.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_101_6
unknown

Not on your lists

comp(5026..5346)
DNA (321bp) protein (107aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_101_trna_7
unknown

Not on your lists

comp(5627..5700)
DNA (74bp)
transferRNA Arg
SCN18_30_10_14_R5_P_scaffold_101_trna_6
unknown

Not on your lists

comp(5766..5839)
DNA (74bp)
transferRNA Pro
SCN18_30_10_14_R5_P_scaffold_101_7
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5906..6610)
DNA (705bp) protein (235aa)
Glutathione S-transferase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJX9_9BURK
Glutathione S-transferase-like protein {ECO:0000313|EMBL:EIK89519.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glutathione S-transferase
SCN18_30_10_14_R5_P_scaffold_101_8
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6610..7869)
DNA (1260bp) protein (420aa)
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:EIK89520.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK89520.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Acyl-CoA dehydrogenase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY0_9BURK
acyl-CoA dehydrogenase-like protein
SCN18_30_10_14_R5_P_scaffold_101_9
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7900..8985)
DNA (1086bp) protein (362aa)
Aminoglycoside phosphotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY1_9BURK
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIK89521.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
aminoglycoside phosphotransferase
SCN18_30_10_14_R5_P_scaffold_101_10
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9014..9733)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89522.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
SCN18_30_10_14_R5_P_scaffold_101_11
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9815..10594)
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIK89523.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EIK89523.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Enoyl-CoA hydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY3_9BURK
unsaturated acyl-CoA hydratase
SCN18_30_10_14_R5_P_scaffold_101_12
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10688..12208)
DNA (1521bp) protein (507aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK89524.1}; EC=1.1.1.35 {ECO:0000313|EMBL:EIK89524.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY4_9BURK
SCN18_30_10_14_R5_P_scaffold_101_13
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12283..14400
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89525.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_101_14
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14455..15462)
DNA (1008bp) protein (336aa)
D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EIK89526.1}; EC=1.1.1.- {ECO:0000313|EMBL:EIK89526.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY6_9BURK
D-isomer specific 2-hydroxyacid dehydrogenase
SCN18_30_10_14_R5_P_scaffold_101_15
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15511..15810)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89527.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
SCN18_30_10_14_R5_P_scaffold_101_16
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15944..16627)
DNA (684bp) protein (228aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY8_9BURK
SCN18_30_10_14_R5_P_scaffold_101_17
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16719..17675
DNA (957bp) protein (319aa)
Putative L-asparaginase (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY9_9BURK
Putative L-asparaginase {ECO:0000313|EMBL:EIK89529.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
asparaginase/glutaminase
SCN18_30_10_14_R5_P_scaffold_101_18
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17823..19082)
DNA (1260bp) protein (420aa)
Natural resistance-associated macrophage protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X779_METSD
Pseudomonas putida strain UASWS0946 Contig191, whole genome shotgun sequence {ECO:0000313|EMBL:KIU42709.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
natural resistance-associated macrophage protein
SCN18_30_10_14_R5_P_scaffold_101_19
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19277..22006)
DNA (2730bp) protein (910aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH37_9BURK
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EIK88527.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
outer membrane autotransporter barrel domain-containing protein
SCN18_30_10_14_R5_P_scaffold_101_20
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22146..22802)
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MS57_9BURK
SCN18_30_10_14_R5_P_scaffold_101_21
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22944..23702)
DNA (759bp) protein (253aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|SAAS:SAAS00089008};; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-deoxy-manno-octulosonate cytidylyltransferase (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MS58_9BURK
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
SCN18_30_10_14_R5_P_scaffold_101_22
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23705..23914)
DNA (210bp) protein (70aa)
UPF0434 protein Q5W_0569 (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT97_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92437.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
uncharacterized conserved protein
SCN18_30_10_14_R5_P_scaffold_101_23
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23944..24984)
DNA (1041bp) protein (347aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT98_9BURK
tetraacyldisaccharide-1-P 4'-kinase
SCN18_30_10_14_R5_P_scaffold_101_24
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24992..25435)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT99_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92439.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
biopolymer transport protein ExbD/TolR
SCN18_30_10_14_R5_P_scaffold_101_25
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25432..26073)
DNA (642bp) protein (214aa)
Biopolymer transport protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA0_9BURK
Biopolymer transport protein {ECO:0000313|EMBL:EIK92440.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
MotA/TolQ/ExbB proton channel
SCN18_30_10_14_R5_P_scaffold_101_26
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26426..27724
DNA (1299bp) protein (433aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA1_9BURK
exodeoxyribonuclease VII large subunit
SCN18_30_10_14_R5_P_scaffold_101_27
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27814..28395
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA2_9BURK
SCN18_30_10_14_R5_P_scaffold_101_28
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28636..30873
DNA (2238bp) protein (746aa)
Isocitrate dehydrogenase, NADP-dependent {ECO:0000313|EMBL:EIK92443.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EIK92443.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42)
Isocitrate dehydrogenase, NADP-dependent n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA3_9BURK
Displaying items 1-30 of 196 in total

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