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SCN18_10_11_15_R1_B_scaffold_464

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_464_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..304)
DNA (303bp) protein (101aa)
SCN18_10_11_15_R1_B_scaffold_464_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301..471)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00037D8FC6
Uncharacterized protein {ECO:0000313|EMBL:EPR19731.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
SCN18_10_11_15_R1_B_scaffold_464_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(574..990)
DNA (417bp) protein (139aa)
Helix-turn-helix domain protein (Modular protein) n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PU62_9RHIZ
Helix-turn-helix domain protein (Modular protein) {ECO:0000313|EMBL:CDN93687.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Helix-turn-helix domain protein (modular protein)
SCN18_10_11_15_R1_B_scaffold_464_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1061..1405)
DNA (345bp) protein (115aa)
SCN18_10_11_15_R1_B_scaffold_464_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1474..1698)
DNA (225bp) protein (75aa)
SCN18_10_11_15_R1_B_scaffold_464_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1785..1973)
DNA (189bp) protein (63aa)
SCN18_10_11_15_R1_B_scaffold_464_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2418..3194)
DNA (777bp) protein (259aa)
Putative phage repressor n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6DYV4_SINMK
Repressor protein C {ECO:0000313|EMBL:CDH84467.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
putative phage repressor
SCN18_10_11_15_R1_B_scaffold_464_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4104..4325
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQX5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AID18391.1}; TaxID=1498228 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage vB_RleM_PPF1.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_464_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4329..5171
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00036B7FA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH78720.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCN18_10_11_15_R1_B_scaffold_464_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5164..5502
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0003114371
CzcR-like response regulator
CzcR-like response regulator {ECO:0000313|EMBL:AEH78721.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCN18_10_11_15_R1_B_scaffold_464_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5499..5741
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LM96_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71836.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_10_11_15_R1_B_scaffold_464_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5738..6328
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQX1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56833.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCN18_10_11_15_R1_B_scaffold_464_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6325..6531
DNA (207bp) protein (69aa)
SCN18_10_11_15_R1_B_scaffold_464_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6528..6764
DNA (237bp) protein (79aa)
SCN18_10_11_15_R1_B_scaffold_464_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6761..8101
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI000370DE71
Uncharacterized protein {ECO:0000313|EMBL:EPR19738.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
dmnA; Methyltransferase-like protein KIAA1627
SCN18_10_11_15_R1_B_scaffold_464_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8098..8409
DNA (312bp) protein (104aa)
SCN18_10_11_15_R1_B_scaffold_464_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8406..9164
DNA (759bp) protein (253aa)
C-5 cytosine-specific DNA methylase 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HGM3_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:KKL28971.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
C-5 cytosine-specific DNA methylase 1
SCN18_10_11_15_R1_B_scaffold_464_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9161..9694
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Burkholderia glumae RepID=UPI00030526EA
Uncharacterized protein {ECO:0000313|EMBL:BAO18876.1}; TaxID=326454 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. M701.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_464_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9691..11613
DNA (1923bp) protein (641aa)
C-5 cytosine-specific DNA methylase n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6BSA2_SINMB
C-5 cytosine-specific DNA methylase
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:AEG04256.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
SCN18_10_11_15_R1_B_scaffold_464_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11610..12173
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNZ7_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71834.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_10_11_15_R1_B_scaffold_464_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12270..12962
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CK96_AGRT5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY46856.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_10_11_15_R1_B_scaffold_464_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12962..13276
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CK95_AGRT5
Strain MEJ076 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02220.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_464_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13293..14492
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7D1F9_AGRT5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK86265.2}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
SCN18_10_11_15_R1_B_scaffold_464_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14492..15178
DNA (687bp) protein (229aa)
transcription antitermination protein NusG n=1 Tax=Rhizobium meliloti RepID=UPI0003732296
Uncharacterized protein {ECO:0000313|EMBL:KDR87210.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
nusG1; Transcription antitermination protein nusG
SCN18_10_11_15_R1_B_scaffold_464_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15555..16124
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H842_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EHJ98841.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_464_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16316..16960
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GNP9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ERP98286.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_464_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16960..18936
DNA (1977bp) protein (659aa)
Probable bacteriophage-related protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NQ80_9RHOB
Probable bacteriophage-related protein {ECO:0000313|EMBL:EAV44938.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
terminase GpA
SCN18_10_11_15_R1_B_scaffold_464_28
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18933..20588
DNA (1656bp) protein (552aa)
Phage portal protein, lambda family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKQ6_RHITR
phage portal protein, lambda family
Phage portal protein, lambda family {ECO:0000313|EMBL:AGB71827.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_10_11_15_R1_B_scaffold_464_29
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20588..20845
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LM85_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71826.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_10_11_15_R1_B_scaffold_464_30
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20856..21884
DNA (1029bp) protein (343aa)
Peptidase S14, ClpP n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP19_RHITR
peptidase S14, ClpP
Peptidase S14, ClpP {ECO:0000313|EMBL:AGB71825.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 51 in total

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