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SCN18_10_11_15_R1_B_scaffold_237_18

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(16053..16835)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein VirB9 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQP5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 260.0
  • Bit_score: 483
  • Evalue 7.50e-134
P-type conjugative transfer protein VirB9 {ECO:0000313|EMBL:EYR82762.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 260.0
  • Bit_score: 483
  • Evalue 1.10e-133
conjugal transfer protein TrbG/VirB9/CagX similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 232.0
  • Bit_score: 213
  • Evalue 4.10e-53

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCGGAAATCTCTCCTTGCCCTCGCCGCCATCTCGCTGCTGGCCATTTCGAATCCCGTGACTGCCGCCGATCCGCGCATCCGCTACATCACCTTCAACAACAATGCCGTCGTCACCGTGCCGGCCGGGCTTGGCGTCTCGACGATGATCCAGCTCGGCAGCTCGGAGGTCATCGAGACGATCTCGGCCGGCGATACGGTGGGCTGGTCGATCGTCCCGAAAAAAGGCTCCGGCATCCTGTTTGTGAAGCCATTGCGCGAGAATGCAGAGACCAACGTGAACATCGTCACCAACCAGCGCGTCTATGCCCTGCTGCTGAAGGGCTCGGCCGCCGCAGACCTGCGCGCCGCATTCCAGGTGCGGTTCAAGTTTCCCGACGAGGACGTCAACGCCCGGCTGCTGGCCGCCGCGCAGGAGAGCGCCAAGGATCCGCTTCTCAAGGATCTCGATCCGAACCGCCTGAACTACGATTATGTGTTCAAGGGCGACACCAGCCTGAAGCCGCGCGTCGCCTTCGACGACGGCACGCATATGTATCTGGAGTTCCCCGACGAAATACCGGCCATTTTCGTCGTCGAAGGCAAGCGCGAGGAATCGCTCGTCAACCTGCGCACCCAGGGCAAATACGTGGTGGTCGACAAGATCGCGGCGCAGTTCACGCTGCGCGCCGGCGACAAGTGGCTGTGCCTTTATAACCGGCAGGCCAATCGCCAATCCTTCGATCTCATCGAGGACGCCTACGGGCCGAAGCGTCTCGGCAGCAAAGAGGAGCGCCAGCGATGA
PROTEIN sequence
Length: 261
MRKSLLALAAISLLAISNPVTAADPRIRYITFNNNAVVTVPAGLGVSTMIQLGSSEVIETISAGDTVGWSIVPKKGSGILFVKPLRENAETNVNIVTNQRVYALLLKGSAAADLRAAFQVRFKFPDEDVNARLLAAAQESAKDPLLKDLDPNRLNYDYVFKGDTSLKPRVAFDDGTHMYLEFPDEIPAIFVVEGKREESLVNLRTQGKYVVVDKIAAQFTLRAGDKWLCLYNRQANRQSFDLIEDAYGPKRLGSKEERQR*