name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_10_11_15_R1_B_scaffold_237_1
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1..147)
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Putative transposase Genetic Information Processing n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5U6_9RHIZ
Putative transposase Genetic Information Processing {ECO:0000313|EMBL:ENN86432.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transposase number 2 for insertion sequence
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SCN18_10_11_15_R1_B_scaffold_237_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(165..593)
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Transposase number 1 for insertion sequence n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X449_RHIFR
transposase number 1 for insertion sequence
Transposase number 1 for insertion sequence {ECO:0000313|EMBL:AFL50655.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
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SCN18_10_11_15_R1_B_scaffold_237_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1046..1306)
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Transposase IS66 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC05_9RHIZ
Mobile element protein {ECO:0000313|EMBL:AIH15786.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;"
transposase
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SCN18_10_11_15_R1_B_scaffold_237_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1369..1575
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BDV3_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EMS97490.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
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SCN18_10_11_15_R1_B_scaffold_237_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1886..2110)
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Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFE2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82776.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
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SCN18_10_11_15_R1_B_scaffold_237_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2126..3115)
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Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2V6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS52934.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
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SCN18_10_11_15_R1_B_scaffold_237_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3393..4271
|
Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2V5_9RHIZ
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHS52933.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
transcriptional regulator
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SCN18_10_11_15_R1_B_scaffold_237_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4378..5604
|
Uncharacterized protein n=2 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HC27_9RHIZ
Major facilitator superfamily {ECO:0000313|EMBL:EYR82828.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transporter protein
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SCN18_10_11_15_R1_B_scaffold_237_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6141..7043
|
Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F387_9RHIZ
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHS52797.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
transcriptional regulator
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SCN18_10_11_15_R1_B_scaffold_237_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7138..7947
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ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F388_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EHS52798.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Histidine transport ATP-binding protein hisP
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SCN18_10_11_15_R1_B_scaffold_237_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7944..8621
|
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F389_9RHIZ
Amino acid ABC transporter membrane protein 1, PAAT family {ECO:0000313|EMBL:EYR82831.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
polar amino acid ABC transporter inner membrane subunit
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SCN18_10_11_15_R1_B_scaffold_237_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8632..9390
|
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F390_9RHIZ
Amino acid ABC transporter membrane protein 2, PAAT family {ECO:0000313|EMBL:EYR82832.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nocM; opine ABC transporter permease
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SCN18_10_11_15_R1_B_scaffold_237_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9387..10538
|
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Alanine racemase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F391_9RHIZ
alanine racemase
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SCN18_10_11_15_R1_B_scaffold_237_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10561..11400
|
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F392_9RHIZ
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:EHS52802.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
nocT; nopaline binding protein of ABC transporter
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SCN18_10_11_15_R1_B_scaffold_237_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11526..13643)
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Conjugal transfer protein TraG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CL71_9RHIZ
Conjugal transfer protein TraG {ECO:0000313|EMBL:EYR82759.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Type IV secretory pathway, VirD4 component
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SCN18_10_11_15_R1_B_scaffold_237_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13640..14638)
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Type IV secretion system protein VirB11 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5I5_9RHIZ
Type IV secretion system protein VirB11 {ECO:0000313|EMBL:EYR82760.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
type II secretion system protein E
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SCN18_10_11_15_R1_B_scaffold_237_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14635..16056)
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Type IV secretion system protein VirB10 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN42_9RHIZ
Type IV secretion system protein VirB10 {ECO:0000313|EMBL:EYR82761.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein
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SCN18_10_11_15_R1_B_scaffold_237_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16053..16835)
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P-type conjugative transfer protein VirB9 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQP5_9RHIZ
P-type conjugative transfer protein VirB9 {ECO:0000313|EMBL:EYR82762.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein TrbG/VirB9/CagX
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SCN18_10_11_15_R1_B_scaffold_237_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16835..17569)
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VirB8 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVE8_9RHIZ
VirB8 {ECO:0000313|EMBL:EYR82763.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
virB8; type IV secretion protein VirB8
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SCN18_10_11_15_R1_B_scaffold_237_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17722..18093)
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Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CL76_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82764.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
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SCN18_10_11_15_R1_B_scaffold_237_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(18106..18339)
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Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5J0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82765.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
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SCN18_10_11_15_R1_B_scaffold_237_22
SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, Plasmid-like
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Not on your lists |
comp(18394..19413)
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Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN46_9RHIZ
Type IV secretory pathway, VirB6 component {ECO:0000313|EMBL:EYR82766.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein
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SCN18_10_11_15_R1_B_scaffold_237_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(19418..19591)
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Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQQ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82767.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
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SCN18_10_11_15_R1_B_scaffold_237_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(19598..20314)
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UPI0003D04ACA related cluster n=1 Tax=unknown RepID=UPI0003D04ACA
Conjugal transfer protein {ECO:0000313|EMBL:EYR82768.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
virB5-2; type IV secretion system protein VirB5 2
|
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SCN18_10_11_15_R1_B_scaffold_237_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20325..21491)
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Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCX9_9RHIZ
Putative soluble lytic transglycosylase {ECO:0000313|EMBL:EYR82769.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Soluble lytic murein transglycosylase-like protein
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SCN18_10_11_15_R1_B_scaffold_237_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21484..23895)
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Type IV secretion system protein VirB4 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXH1_9RHIZ
Type IV secretion/conjugal transfer ATPase, VirB4 family {ECO:0000313|EMBL:EYR82770.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
type IV secretion/conjugal transfer ATPase
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SCN18_10_11_15_R1_B_scaffold_237_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23892..24182)
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Type IV secretory pathway, VirB3 component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFD6_9RHIZ
Type IV secretory pathway, VirB3 component {ECO:0000313|EMBL:EYR82771.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
type IV secretory pathway, VirB3-like
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SCN18_10_11_15_R1_B_scaffold_237_28
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(24184..24507)
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Type IV secretory pathway, VirB2 component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHH5_9RHIZ
Type IV secretory pathway, VirB2 component {ECO:0000313|EMBL:EYR82772.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein trbc
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SCN18_10_11_15_R1_B_scaffold_237_29
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24554..25033)
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Lytic transglycosylase catalytic n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMB5_9RHIZ
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EYR82773.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lytic transglycosylase catalytic
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SCN18_10_11_15_R1_B_scaffold_237_30
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25202..25819
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCY4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82774.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
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