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SCN18_10_11_15_R1_B_scaffold_237_29

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(24554..25033)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMB5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 159.0
  • Bit_score: 294
  • Evalue 5.20e-77
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EYR82773.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 159.0
  • Bit_score: 294
  • Evalue 7.30e-77
lytic transglycosylase catalytic similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 144.0
  • Bit_score: 116
  • Evalue 4.20e-24

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
GTGCTGGAGCTGGTGCGGACCATCGCCACAGAGGAAGAACTGGACCCCGACCTGGCGCTCGCGGTGGTTGATGTCGAGAGTTCCGGCGGCAGGCACCAGGTCTCCGATGCCGGCGCCGTCGGCATCATGCAGCTGATGCCTGAGACCGCCTCCGACTACGGCGTGACCGACCGCTGCGATCCGGAATCGAACATTCGCGCCGGCGTCCGTTACCTCAAGAAGCTCTATGGCGAGTTCGACGACCCCCTGCTGATGCTGGCCGCCTACAACGCCGGTCCGGAGCGCGTCTACCAGAAGGGCGGCATCCCCGAGTTCAACGAGACAGCCCAGTACATCGTCAAGGTGATGAACCGCTGGACGCTGAACGCCAAGGCATCGGCGGCCGAGGAAAAGCGCCGCGGGAACCGCGACGCCCGCAAGGAGACGGTCGCGCTCGCGCCCTCCCCCTGGCGCGACCAACACGTCTGGACGGCCGACTAG
PROTEIN sequence
Length: 160
VLELVRTIATEEELDPDLALAVVDVESSGGRHQVSDAGAVGIMQLMPETASDYGVTDRCDPESNIRAGVRYLKKLYGEFDDPLLMLAAYNAGPERVYQKGGIPEFNETAQYIVKVMNRWTLNAKASAAEEKRRGNRDARKETVALAPSPWRDQHVWTAD*