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SCN18_10_11_15_R1_B_scaffold_237_24

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(19598..20314)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D04ACA related cluster n=1 Tax=unknown RepID=UPI0003D04ACA similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 240.0
  • Bit_score: 308
  • Evalue 3.00e-81
Conjugal transfer protein {ECO:0000313|EMBL:EYR82768.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 238.0
  • Bit_score: 436
  • Evalue 2.30e-119
virB5-2; type IV secretion system protein VirB5 2 similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 231.0
  • Bit_score: 182
  • Evalue 1.20e-43

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGAACAAAATGCTCATCGCCACTGCCGCCCTTGCCTTCTCGACGCCGGCGCTCGCCGACATTCCCGTGATCGACAACACCAATCTCGCCATCGCCAAGAAGAACGCGGAAAACACCGGCGAGATCATGAAGACCAACACCAATATCCTCGAAAAGACCAAGGAGATCCTCGGCGCCTTGTCCGGCAGCCGCGACGGCTCGATGGGAATTTCCTCGACCGGCCTTGGCGGCAACATGTCGGTCTCGGCCGCGCCGTCCTTCTCGTCGATCATGAACGGCGGCATTCTGTCTTTCGGCGGGCTTGGCTCCGATGCGCAGAATATCGCCGCGACGCTGATCAACGGCCTGCAGTTGGTAAAACAGGTTAAGGCGATCGTTGAGGGCGAGGATGCCGGCGCGATGAACAATGCCTTCTCCGGGGCGGTCAACACCGTGGCGCTGCTCTCGGCGCTGACGCAGCAGGCGACCAAGGGTGTGTCGCAGCGCGAGCAATCGTTGCAGTCGGCCACCGGCCAGATCGGCTCGGCCGAGGACGTGAAAGGTTCGGTCGATGCGAACACCCGGATGCAGCTGGAGACGGCGCGTACCATCAACGAGCTGATCGGCGTCTCCAACGGCGCGGTCTCCGCGCTCAATACCGAAATGCAGATGCGACTGACCCAGCAGTCCGAGACCGCCAAGATGCTGCAGTACAAAGACGTCAACCCGTTCAAGTGA
PROTEIN sequence
Length: 239
MNKMLIATAALAFSTPALADIPVIDNTNLAIAKKNAENTGEIMKTNTNILEKTKEILGALSGSRDGSMGISSTGLGGNMSVSAAPSFSSIMNGGILSFGGLGSDAQNIAATLINGLQLVKQVKAIVEGEDAGAMNNAFSGAVNTVALLSALTQQATKGVSQREQSLQSATGQIGSAEDVKGSVDANTRMQLETARTINELIGVSNGAVSALNTEMQMRLTQQSETAKMLQYKDVNPFK*