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SCN18_10_11_15_R1_B_scaffold_237_22

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(18394..19413)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN46_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 339.0
  • Bit_score: 639
  • Evalue 1.40e-180
Type IV secretory pathway, VirB6 component {ECO:0000313|EMBL:EYR82766.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 339.0
  • Bit_score: 639
  • Evalue 2.00e-180
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 351.0
  • Bit_score: 180
  • Evalue 6.60e-43

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Taxonomy

SCNPILOT_EXPT_750_BF_Plasmid_61_16 → SCNPILOT_EXPT_750_BF_Plasmid_61_16 → SCNPILOT_EXPT_750_BF_Plasmid_61_16 → SCNPILOT_EXPT_750_BF_Plasmid_61_16 → SCNPILOT_EXPT_750_BF_Plasmid_61_16 → Plasmid-like

Sequences

DNA sequence
Length: 1020
ATGGCGGCGACCACGATCATTTCGGACATTTTTGCCAAGCTCGACGCCATTGGCGAGACGTTCATCAAGAACGCCTATGACGGCCTCGCGCTGCAGGTGAACGTCCTGTTCGGGTCGATGCTCACCCTCTATGTCCTCTGGTGGGGCTATATGATCCTCGCCGGCCGCGACGGCTTTTCCGTGCCGGAAGCGGCGTGGCGGCTCGGCCGCGCCTTCTTCATCTACTATATGGCGACGAATTGGGGGGCATTTTCAGCCACGCTCTACAAGCTCGTTCAGGAAGTGCCCAACCTCATCTCCGACACGATCATCGAGTCGATCGCTGGTTCCGGTGGTGCGCTCGACGGCGGCACGGGCGACACGACGGGCGTCGTGAAGATCCTCGACGCGGTGTTCGAGACCGCAGGCAAGATTTATGAGCAGGTGGCGACCGGCACCTTCGAATATGTCGGCGCTCTCATCGGTGCGATCGTCTTTGTCGTCGCCATGATCTTCATCGCCGTCGCGGCCGCCGCGATCCTTGCCGCCAAGCTGATGCTCTTCATTACGCTGGCGCTCGCGCCGGTGTTCATCATCCTGGCGCTCTATCGCTGGACCTTCCGCTTCACCGACGGCTGGCTGTTGCTGATGGTCAACCTGATGGTGACGCAGACCCTGATGATGGCCTTTCTCGCCTTTTTGTACCAGCTCATCGAACTGGCCATCAATACGGCCAACAATACCGCGACCGAAAGCAAGCTCTCCTATGTCGCGCCCTTCGTGATCGTCTGCCTGCTCGGGATCGTCGTGTTTCGCTTTATTCCATCCTTTGCCAGCGCGATCGTTGGCGGGATGCCGCTCGGCCAAGGAGACACGCCGGCGCTCGGCGGGTGGCGCTCGACCTTGTGGGCGACAAGACAGGTGACGGGAAGGGCAAGAATCATGTCGGTCGGCCTCGCCAAGCGTCGGACCGCTTCGGACGTCAAAGCTGCCCGGGCGAGAGCGATCCAACGTGAAACGGAGAGAAATGGTCAACTTTGA
PROTEIN sequence
Length: 340
MAATTIISDIFAKLDAIGETFIKNAYDGLALQVNVLFGSMLTLYVLWWGYMILAGRDGFSVPEAAWRLGRAFFIYYMATNWGAFSATLYKLVQEVPNLISDTIIESIAGSGGALDGGTGDTTGVVKILDAVFETAGKIYEQVATGTFEYVGALIGAIVFVVAMIFIAVAAAAILAAKLMLFITLALAPVFIILALYRWTFRFTDGWLLLMVNLMVTQTLMMAFLAFLYQLIELAINTANNTATESKLSYVAPFVIVCLLGIVVFRFIPSFASAIVGGMPLGQGDTPALGGWRSTLWATRQVTGRARIMSVGLAKRRTASDVKAARARAIQRETERNGQL*