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SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

SCN18_10_11_15_R1_B_unknown_63_17
In projects: SCN18_10_11_15_R1_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy:

Description

SCN18_10_11_15_R1_B_abawaca_073

Displaying items 51-100 of 108 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_10_11_15_R1_B_scaffold_827
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (91.67%)
24 19877 bp 59.17 15.54 89.49
SCN18_10_11_15_R1_B_scaffold_247
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (77.53%)
89 85578 bp 61.97 15.58 92.56
SCN18_10_11_15_R1_B_scaffold_2134
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
12 9035 bp 64.31 15.71 92.31
SCN18_10_11_15_R1_B_scaffold_2410
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
8 8126 bp 62.93 15.75 80.63
SCN18_10_11_15_R1_B_scaffold_89
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (95.94%)
246 227499 bp 62.19 15.82 88.14
SCN18_10_11_15_R1_B_scaffold_378
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (97.92%)
48 50032 bp 62.44 15.88 89.77
SCN18_10_11_15_R1_B_scaffold_277
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (77.61%)
67 72634 bp 62.28 15.89 86.64
SCN18_10_11_15_R1_B_scaffold_2705
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 (50%)
6 7433 bp 60.66 15.92 89.52
SCN18_10_11_15_R1_B_scaffold_599
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
35 28068 bp 59.65 16.09 85.53
SCN18_10_11_15_R1_B_scaffold_950
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (88%)
25 17621 bp 60.69 16.10 81.65
SCN18_10_11_15_R1_B_scaffold_557
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (97.44%)
39 29453 bp 62.41 16.17 88.75
SCN18_10_11_15_R1_B_scaffold_240
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (80.68%)
88 87857 bp 62.68 16.18 91.00
SCN18_10_11_15_R1_B_scaffold_133
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (99.17%)
242 250101 bp 63.02 16.30 88.81
SCN18_10_11_15_R1_B_scaffold_310
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
70 63569 bp 63.36 16.34 88.71
SCN18_10_11_15_R1_B_scaffold_400
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
49 45825 bp 63.20 16.62 86.67
SCN18_10_11_15_R1_B_scaffold_1871
Order: Rhizobiales (90%)
10 10078 bp 60.34 16.63 84.40
SCN18_10_11_15_R1_B_scaffold_31
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (98.12%)
372 394584 bp 63.04 16.71 89.90
SCN18_10_11_15_R1_B_scaffold_165
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
111 134661 bp 63.59 16.82 92.90
SCN18_10_11_15_R1_B_scaffold_282
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (98.7%)
77 70479 bp 63.41 16.85 88.09
SCN18_10_11_15_R1_B_scaffold_857
Order: Rhizobiales (65%)
20 19178 bp 63.93 16.86 91.72
SCN18_10_11_15_R1_B_scaffold_142
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
153 164087 bp 63.36 16.94 91.41
SCN18_10_11_15_R1_B_scaffold_479
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
32 35660 bp 63.35 16.94 89.06
SCN18_10_11_15_R1_B_scaffold_339
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (98.25%)
57 56632 bp 63.02 16.95 87.86
SCN18_10_11_15_R1_B_scaffold_186
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (99.14%)
116 120601 bp 63.68 16.98 89.01
SCN18_10_11_15_R1_B_scaffold_1644 12 11075 bp 62.42 17.04 89.01
SCN18_10_11_15_R1_B_scaffold_622
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
22 26656 bp 63.72 17.08 90.16
SCN18_10_11_15_R1_B_scaffold_83
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
225 244566 bp 62.87 17.10 90.29
SCN18_10_11_15_R1_B_scaffold_103
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
183 209957 bp 64.11 17.18 91.15
SCN18_10_11_15_R1_B_scaffold_77
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
243 250593 bp 64.00 17.21 91.84
SCN18_10_11_15_R1_B_scaffold_5609
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
6 4089 bp 66.20 17.24 93.76
SCN18_10_11_15_R1_B_scaffold_285
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (99.22%)
128 128455 bp 63.66 17.24 89.84
SCN18_10_11_15_R1_B_scaffold_1294
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
11 13716 bp 63.60 17.32 85.50
SCN18_10_11_15_R1_B_scaffold_359
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (98.11%)
53 52543 bp 64.28 17.35 91.05
SCN18_10_11_15_R1_B_scaffold_32
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
346 385597 bp 64.44 17.40 92.21
SCN18_10_11_15_R1_B_scaffold_157
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (97.52%)
161 150399 bp 63.18 17.45 89.03
SCN18_10_11_15_R1_B_scaffold_108
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (98.94%)
189 206150 bp 63.86 17.50 89.45
SCN18_10_11_15_R1_B_scaffold_309
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
58 63817 bp 64.52 17.52 90.94
SCN18_10_11_15_R1_B_scaffold_179
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
112 125868 bp 64.77 17.53 93.49
SCN18_10_11_15_R1_B_scaffold_68
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
243 271714 bp 64.41 17.55 89.96
SCN18_10_11_15_R1_B_scaffold_221
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (99.5%)
201 206439 bp 64.00 17.63 90.87
SCN18_10_11_15_R1_B_scaffold_413
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
39 44477 bp 64.66 17.64 88.93
SCN18_10_11_15_R1_B_scaffold_244
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (99.33%)
150 147215 bp 63.24 17.65 87.65
SCN18_10_11_15_R1_B_scaffold_52
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (99.08%)
325 313698 bp 63.63 17.65 88.16
SCN18_10_11_15_R1_B_scaffold_680
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
22 24485 bp 62.58 17.74 89.59
SCN18_10_11_15_R1_B_scaffold_187
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
113 119047 bp 64.22 17.76 92.42
SCN18_10_11_15_R1_B_scaffold_830
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
27 19853 bp 61.82 17.76 86.87
SCN18_10_11_15_R1_B_scaffold_79
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (99.53%)
214 247574 bp 64.47 17.95 92.01
SCN18_10_11_15_R1_B_scaffold_252
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
73 83025 bp 63.20 18.00 92.35
SCN18_10_11_15_R1_B_scaffold_105
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
201 207906 bp 64.77 18.01 89.73
SCN18_10_11_15_R1_B_scaffold_55
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (98.97%)
292 306795 bp 64.27 18.16 90.28
Displaying items 51-100 of 108 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.