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SCN18_14_9_16_R4_B_scaffold_2555

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2555_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..106)
DNA (105bp) protein (35aa)
RNA methyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489319
Putative RNA methyltransferase {ECO:0000313|EMBL:GAL99353.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
Fmu (Sun) domain-containing protein
SCN18_14_9_16_R4_B_scaffold_2555_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(103..1560)
DNA (1458bp) protein (486aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
inosine-5-monophosphate dehydrogenase (EC:1.1.1.205)
inosine-5`-monophosphate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00037B06F3
SCN18_14_9_16_R4_B_scaffold_2555_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1770..2780
DNA (1011bp) protein (337aa)
SPFH domain / Band 7 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSU8_9SPHN
QmcA protein {ECO:0000313|EMBL:GAN13007.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
membrane protein
SCN18_14_9_16_R4_B_scaffold_2555_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2777..3262
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C9422
NfeD-like family protein {ECO:0000313|EMBL:EZP49079.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
membrane protein
SCN18_14_9_16_R4_B_scaffold_2555_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3227..3565)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB05F
Uncharacterized protein {ECO:0000313|EMBL:EZP54587.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2555_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3637..5247)
DNA (1611bp) protein (537aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phosphoenolpyruvate carboxykinase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002891560
phosphoenolpyruvate carboxykinase [ATP]
SCN18_14_9_16_R4_B_scaffold_2555_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5372..6079
DNA (708bp) protein (236aa)
Response regulator n=1 Tax=Sphingomonas sp. S17 RepID=F3WSU5_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAL99363.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_2555_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6048..7631
DNA (1584bp) protein (528aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
HAMP domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSU4_9SPHN
histidine kinase
SCN18_14_9_16_R4_B_scaffold_2555_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7628..8047
DNA (420bp) protein (140aa)
HPr kinase/phosphorylase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YZY0_SPHJU
Putative HPr kinase/phosphorylase {ECO:0000313|EMBL:GAO38439.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ptsK; HPr kinase/phosphorylase
SCN18_14_9_16_R4_B_scaffold_2555_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8044..8958
DNA (915bp) protein (305aa)
nucleotide-binding protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289B9DA
Nucleotide-binding protein BW41_03739 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
nucleotide-binding protein
SCN18_14_9_16_R4_B_scaffold_2555_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8955..9383
DNA (429bp) protein (143aa)
PTS fructose transporter subunit IIA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036B17B6
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:KHA65097.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
PTS fructose transporter subunit IIA
SCN18_14_9_16_R4_B_scaffold_2555_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9380..9649
DNA (270bp) protein (90aa)
HPr kinase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB067
Phosphocarrier protein HPr {ECO:0000313|EMBL:GAL99358.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
phosphate ABC transporter permease
SCN18_14_9_16_R4_B_scaffold_2555_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9793..10560
DNA (768bp) protein (256aa)
RNA methyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036508BF
DNA, contig: SP614 {ECO:0000313|EMBL:GAN13016.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
RNA methyltransferase
Displaying 13 items

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