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SCN18_14_9_16_R4_B_scaffold_2738

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2738_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..750
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G5Q3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99030.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative cation uptake system protein
SCN18_14_9_16_R4_B_scaffold_2738_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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766..1251
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037CFCB4
Uncharacterized protein {ECO:0000313|EMBL:GAD58471.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2738_3
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1260..1649
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287E3A9
Uncharacterized protein {ECO:0000313|EMBL:KKB64252.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2738_4
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1763..2218
DNA (456bp) protein (152aa)
SCN18_14_9_16_R4_B_scaffold_2738_5
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2229..3491)
DNA (1263bp) protein (421aa)
carbohydrate-selective porin OprB n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A8F
carbohydrate-selective porin oprb
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ADU12564.1}; Flags: Precursor;; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCN18_14_9_16_R4_B_scaffold_2738_6
unknown

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comp(3987..4133)
DNA (147bp) protein (49aa)

This feature has no annotations

SCN18_14_9_16_R4_B_scaffold_2738_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4161..4592)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RU85_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC22310.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCN18_14_9_16_R4_B_scaffold_2738_8
scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, Plasmid-like

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comp(5375..5878)
DNA (504bp) protein (168aa)
heat-shock protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B73B93
Heat-shock protein {ECO:0000313|EMBL:EQB06395.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
small heat shock protein
Displaying 8 items

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