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SCN18_14_9_16_R4_B_scaffold_1283

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1283_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..324)
DNA (324bp) protein (108aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Sphingomonas sp. S17 RepID=F3WU36_9SPHN
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:GAM02453.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
SCN18_14_9_16_R4_B_scaffold_1283_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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438..1016
DNA (579bp) protein (193aa)
Uracil-DNA glycosylase n=1 Tax=Sphingobium baderi LL03 RepID=T0GC66_9SPHN
Putative uracil-DNA glycosylase {ECO:0000313|EMBL:KFL47126.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
uracil-DNA glycosylase
SCN18_14_9_16_R4_B_scaffold_1283_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1161..2042
DNA (882bp) protein (294aa)
glycosyl transferase family 2 n=1 Tax=Sphingomonas elodea RepID=UPI00026321A3
Putative glycosyltransferase {ECO:0000313|EMBL:GAL99707.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
glycosyl transferase family 2
SCN18_14_9_16_R4_B_scaffold_1283_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2039..2851
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035C92E2
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29529.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1283_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2858..3394
DNA (537bp) protein (179aa)
RNA polymerase sigma-70 factor n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5F9
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIT05927.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1283_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3387..4322
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037B437C
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29527.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1283_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4273..6639
DNA (2367bp) protein (789aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289E6D4
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:EZP57475.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
TonB-dependent receptor
SCN18_14_9_16_R4_B_scaffold_1283_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6682..8484)
DNA (1803bp) protein (601aa)
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B70820
fumarate reductase
Fumarate reductase {ECO:0000313|EMBL:AJP73821.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_1283_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8484..8867)
DNA (384bp) protein (128aa)
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4B0DC
Succinate dehydrogenase {ECO:0000313|EMBL:KHA63260.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
succinate dehydrogenase
SCN18_14_9_16_R4_B_scaffold_1283_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8867..9214)
DNA (348bp) protein (116aa)
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B36DD1
Succinate dehydrogenase {ECO:0000313|EMBL:KHA63259.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
succinate dehydrogenase
SCN18_14_9_16_R4_B_scaffold_1283_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9446..10810
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036457E8
Chemotaxis protein {ECO:0000313|EMBL:KHA63258.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
chemotaxis protein
SCN18_14_9_16_R4_B_scaffold_1283_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10855..11814
DNA (960bp) protein (320aa)
ribose 1,5-bisphosphate phosphokinase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003691BA6
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:GAO39437.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ribonucleotide-diphosphate reductase subunit beta
SCN18_14_9_16_R4_B_scaffold_1283_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11860..12726)
DNA (867bp) protein (289aa)
phenylalanine-4-hydroxylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF39
Phenylalanine-4-hydroxylase {ECO:0000313|EMBL:KHA64074.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
phenylalanine-4-hydroxylase
SCN18_14_9_16_R4_B_scaffold_1283_14
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12792..13220)
DNA (429bp) protein (143aa)
peroxiredoxin n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7A800
Peroxiredoxin OsmC {ECO:0000313|EMBL:KHA62965.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
peroxiredoxin OsmC
SCN18_14_9_16_R4_B_scaffold_1283_15
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13303..13494)
DNA (192bp) protein (64aa)
Rickettsia 17 kDa surface antigen family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0E9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00145.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
surface antigen
Displaying 15 items

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