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SCN18_14_9_16_R4_B_scaffold_1514

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1514_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..243
DNA (243bp) protein (81aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Sphingomonas melonis RepID=UPI000367A8E6
SCN18_14_9_16_R4_B_scaffold_1514_2
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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240..698
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028A124E
Uncharacterized protein {ECO:0000313|EMBL:GAO55502.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1514_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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698..3304
DNA (2607bp) protein (869aa)
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7I0_9SPHN
Hopanoid-associated RND transporter, hpnN {ECO:0000313|EMBL:GAO55501.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hopanoid biosynthesis associated RND transporter-like protein HpnN
SCN18_14_9_16_R4_B_scaffold_1514_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3273..4154)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7G4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55486.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1514_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4247..5155)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0F6
Uncharacterized protein {ECO:0000313|EMBL:GAO55487.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1514_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5165..6007)
DNA (843bp) protein (281aa)
Hopanoid biosynthesis associated protein HpnK n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7G6_9SPHN
Cellobiose phosphotransferase system celC {ECO:0000313|EMBL:GAO55488.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hopanoid biosynthesis associated protein HpnK
SCN18_14_9_16_R4_B_scaffold_1514_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6110..7558)
DNA (1449bp) protein (483aa)
radical SAM protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002881EB0
Fe-S oxidoreductase {ECO:0000313|EMBL:GAO55489.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hopanoid biosynthesis associated radical SAM protein HpnJ
SCN18_14_9_16_R4_B_scaffold_1514_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7555..8721)
DNA (1167bp) protein (389aa)
Ceramide glucosyltransferase {ECO:0000313|EMBL:GAO55490.1}; EC=2.4.1.80 {ECO:0000313|EMBL:GAO55490.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hopanoid biosynthesis associated glycosyl transferase HpnI n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FA
hopanoid biosynthesis associated glycosyl transferase protein HpnI
SCN18_14_9_16_R4_B_scaffold_1514_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8854..9858
DNA (1005bp) protein (335aa)
Dihydroflavonol-4-reductase {ECO:0000313|EMBL:GAO55491.1}; EC=1.1.1.219 {ECO:0000313|EMBL:GAO55491.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
NAD-dependent dehydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FB
hopanoid-associated sugar epimerase
SCN18_14_9_16_R4_B_scaffold_1514_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9855..10988
DNA (1134bp) protein (378aa)
Phytoene synthase {ECO:0000313|EMBL:GAO55492.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55492.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Hopene-associated glycosyltransferase HpnB n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H0_9SPHN
hopene-associated glycosyltransferase HpnB
SCN18_14_9_16_R4_B_scaffold_1514_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10985..11590
DNA (606bp) protein (202aa)
Squalene synthase HpnC n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H1_9SPHN
Squalene synthase HpnC {ECO:0000313|EMBL:EGD59483.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
squalene synthase HpnC
Displaying 11 items

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