ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1366_11

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 10509..11456

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 318.0
  • Bit_score: 404
  • Evalue 7.60e-110
diaminopimelate epimerase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB45 similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 309.0
  • Bit_score: 395
  • Evalue 4.30e-107
diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 314.0
  • Bit_score: 391
  • Evalue 2.30e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGCGGTTCGAAATCGTCAAATGCCACGGATCGGGAAATGACTTCCCGCTGATCGACGCGCGCGACATCGCGCTGGATGATACGCAATGGTCGGTGGTCGCGCGCGCGCTCGCCGACCGGCGCGGCGCGGTGGGGGGCGATGGCCTGCTCATCATGCAGGAAAGCCACGGGCATATCCGTTTCCGCATGTGGAATGCGGACGGCTCGGAGGCGGAGACCTGCCTCAACGGGGTGCGCTGCGTCGCGCGGATGGCGTTCGAGCGGCTCGGCCTCGATCGCGCGACGCTGCACCTGATGCGCTCGACCGTCGACGTGACGCGCGAGCCCGATCTGGCGCCGGGGGTGCATACCGTGCGCGAGGTCGCCGGGCCGGCGTCGCTCGATATCGCCGAATGGCCACTGCTCGGCGAGGGGCATGAGATTATCGAGCGGCCGCTGGCGCGACTCGATCCGGTGCTGGCCTTTACCGCGGTGGCGATGCCCAACCCGCATCTGGTGACCTTCGTCGACGCGATCGACGAGGCGGTGCTGGTGCGGATCGGCGCGGCGTGCGAGGCGGCGCCCGACTGGCTGCCCAATCGCGCCAATGTGTCGTTCGTGCGCGTGCTGGGGCCGGATGCGATCTATGTCCGCACCTTCGAGCGCGGGGTGGGGCTGACCGACAGCTGTGGCAGCGCGATGGCGGCCTCCGCCTTCGCCGCGGCGCTGACCGGGCGCACCGCCTTCGATCGCGAAGTGATCGTGCGCAACAAGGGCGGGCTGGTGACCGCGCGCGCCGAGGGCGACGGGATGGTCGCGCTGAGCGGCAATGCGACCTGGGAATGGGAAGGCGCGGTGAGCGTCGATTTCGCCGAGCAACTCGCCGGCGACCTGACCGTCGCGCATCATTTCAACGACGAGATCGCGGCCTGGGCCGCAGTCGCCGAGCAAAGCGCGGCGGCGGTATGA
PROTEIN sequence
Length: 316
MRFEIVKCHGSGNDFPLIDARDIALDDTQWSVVARALADRRGAVGGDGLLIMQESHGHIRFRMWNADGSEAETCLNGVRCVARMAFERLGLDRATLHLMRSTVDVTREPDLAPGVHTVREVAGPASLDIAEWPLLGEGHEIIERPLARLDPVLAFTAVAMPNPHLVTFVDAIDEAVLVRIGAACEAAPDWLPNRANVSFVRVLGPDAIYVRTFERGVGLTDSCGSAMAASAFAAALTGRTAFDREVIVRNKGGLVTARAEGDGMVALSGNATWEWEGAVSVDFAEQLAGDLTVAHHFNDEIAAWAAVAEQSAAAV*