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SCN18_14_9_16_R4_B_scaffold_3148_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(29..1126)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 362.0
  • Bit_score: 589
  • Evalue 1.90e-165
pseudouridine synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B367B2 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 359.0
  • Bit_score: 607
  • Evalue 8.30e-171
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 363.0
  • Bit_score: 577
  • Evalue 2.60e-162

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGAGCGAGGCCGTCCGCCAGTTCACCGTCGCCCCCGATGACGACGGCATCCGCGTCGATCGCTGGTTCAAGCGGCATTTGCCCGACACCAGCTTCACGATCGTCGCCAAATGGGCGCGCACCGGGCAACTCCGGCTCGACGGCGCGCGGGTCGGCCCTGGCGATCGCGTCGCCGCCGGTCAGGTGCTGCGCGTGCCCCCGGCCGAGCCGGTGCGTGCCGACGCGCGGCCGGTGCGCCAGCGCCCCACCCTCTCCGAGGATGAAGTGGCGTTCGCGCGCGAAATGGTGATCCACAAGGACGATGCCGCGCTGGTGCTCAACAAGCCCCCCGGCCTCGCGACGCAGGGCGGCACCAAGACCACCGCGCATGTCGACGGCCTGCTCGATGCGCTCGCCTTCGAGGCGGAGGGGCGGCCCAAGCTGGTCCACCGGCTCGACAAGGATACGTCGGGCGCGCTGCTCGTCGCGCGCACCGCGCGGGCGGCGGCGTTCTTCGCCAAATCCTTCTCGGGGCGCTCGGCGAAGAAAGTCTATTGGGCGCTGGTCGTCGGCGTGCCCTCGATCGAGGACGGCACGATCGACCTGCCGATCGCCAAGCAACCCGGCACCGGCGGCGAGAAGATGCATGTCGACGAGGCCGAGGGCCAGATCGCACGCAGCCGCTATCGCGTGATCGAGCGCGCCGGCAATCGCGCGGCCTGGGTCGAGCTGCAGCCGTTCACCGGGCGCACCCACCAGTTGCGCGTCCATATGGCGGCGATCGGCCACCCGATCCTCGGCGACGGCAAATATGGCGGGCAGGCGGCGTTCCTGACCGGCGGGATCAGCCGCAAGATGCACCTCCACGCGCGGCGCATCCGCGTCGATCACCCCGATGGCGGCAAGATCGACGTCACCGCCGAGCTGCCGCATCATTTCGCGGAGAGCCTCGCCGGGCTCGGCTTCGACCCGGCGGCGGGCGACAATCTGCCCCCCGACACCCCGCCGCCGCCGACGCGCGAGACGCAAAAGGCCAAGGCGCGCGCGCATGCCAAGACGGTGCGCAAGGCGCGGCGCGGCGAGCGGCGCTCGCGCGGGCCGGGCGGCGGACGCGGCTGA
PROTEIN sequence
Length: 366
MSEAVRQFTVAPDDDGIRVDRWFKRHLPDTSFTIVAKWARTGQLRLDGARVGPGDRVAAGQVLRVPPAEPVRADARPVRQRPTLSEDEVAFAREMVIHKDDAALVLNKPPGLATQGGTKTTAHVDGLLDALAFEAEGRPKLVHRLDKDTSGALLVARTARAAAFFAKSFSGRSAKKVYWALVVGVPSIEDGTIDLPIAKQPGTGGEKMHVDEAEGQIARSRYRVIERAGNRAAWVELQPFTGRTHQLRVHMAAIGHPILGDGKYGGQAAFLTGGISRKMHLHARRIRVDHPDGGKIDVTAELPHHFAESLAGLGFDPAAGDNLPPDTPPPPTRETQKAKARAHAKTVRKARRGERRSRGPGGGRG*