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SCN18_14_9_16_R4_B_scaffold_3148

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_3148_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29..1126)
DNA (1098bp) protein (366aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
pseudouridine synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B367B2
pseudouridine synthase
SCN18_14_9_16_R4_B_scaffold_3148_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1123..1503)
DNA (381bp) protein (127aa)
camphor resistance protein CrcB n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5A427
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
camphor resistance protein CrcB
SCN18_14_9_16_R4_B_scaffold_3148_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1618..1839
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PBV1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL48521.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
membrane protein
SCN18_14_9_16_R4_B_scaffold_3148_4
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1845..2480)
DNA (636bp) protein (212aa)
hmgC; maleylacetoacetate isomerase (EC:5.2.1.2)
Maleylacetoacetate isomerase {ECO:0000313|EMBL:BAI98523.1}; EC=5.2.1.2 {ECO:0000313|EMBL:BAI98523.1};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
maleylacetoacetate isomerase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B33B93
SCN18_14_9_16_R4_B_scaffold_3148_5
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2477..3802)
DNA (1326bp) protein (442aa)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015614};; Homogentisate oxygenase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisic acid oxidase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisicase {ECO:0000256|HAMAP-Rule:MF_00334}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
homogentisate 1,2-dioxygenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4AC8E
SCN18_14_9_16_R4_B_scaffold_3148_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3937..5199)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQU6_THIA3
Uncharacterized protein {ECO:0000313|EMBL:KHS41776.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein; putative exported protein
SCN18_14_9_16_R4_B_scaffold_3148_trna_1
unknown

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comp(5391..5464)
DNA (74bp)
transferRNA Pro
SCN18_14_9_16_R4_B_scaffold_3148_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5557..5745)
DNA (189bp) protein (63aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289C988
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AJP72148.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 8 items

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