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SCN18_30_10_14_R1_B_scaffold_2100

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2100_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..380
DNA (378bp) protein (126aa)
Putative lytic transglycosylase {ECO:0000313|EMBL:BAK67131.1}; EC=3.2.1.- {ECO:0000313|EMBL:BAK67131.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative lytic transglycosylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW1_9SPHN
putative lytic transglycosylase
SCN18_30_10_14_R1_B_scaffold_2100_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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380..907
DNA (528bp) protein (176aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW2_9SPHN
moaB; molybdenum cofactor biosynthesis protein B
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2100_3
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(951..1490)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003639EBB
Uncharacterized protein {ECO:0000313|EMBL:KKB13146.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2100_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1551..2612)
DNA (1062bp) protein (354aa)
Methyl-accepting chemotaxis protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WCY7_9SPHN
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EJK80688.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
methyl-accepting chemotaxis sensory transducer
SCN18_30_10_14_R1_B_scaffold_2100_5
unknown

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comp(2994..3314)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002EEE1FD
SCN18_30_10_14_R1_B_scaffold_2100_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3622..5160)
DNA (1539bp) protein (513aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Proline--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW4_9SPHN
proS; prolyl-tRNA synthetase
SCN18_30_10_14_R1_B_scaffold_2100_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5336..5887)
DNA (552bp) protein (184aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW6_9SPHN
polyhydroxyalkanoate synthesis repressor PhaR
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:BAK67136.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2100_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6171..7010
DNA (840bp) protein (280aa)
Polyhydroxyalkanoate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW7_9SPHN
polyhydroxyalkanoate synthase
Polyhydroxyalkanoate synthase {ECO:0000313|EMBL:BAK67137.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2100_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7081..8253
DNA (1173bp) protein (391aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:BAK67138.1}; EC=2.3.1.9 {ECO:0000313|EMBL:BAK67138.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Acetyl-CoA acetyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW8_9SPHN
acetyl-CoA acetyltransferase
SCN18_30_10_14_R1_B_scaffold_2100_10
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8417..9883
DNA (1467bp) protein (489aa)
Putative response regulator receiver protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW9_9SPHN
putative response regulator receiver protein
Putative response regulator receiver protein {ECO:0000313|EMBL:BAK67139.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2100_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9946..10692)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Triosephosphate isomerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ87_9SPHN
tpiA; triosephosphate isomerase
SCN18_30_10_14_R1_B_scaffold_2100_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10856..12814
DNA (1959bp) protein (653aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ88_9SPHN
putative peptidyl-prolyl cis-trans isomerase
SCN18_30_10_14_R1_B_scaffold_2100_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12789..14342
DNA (1554bp) protein (518aa)
Anthranilate synthase component I {ECO:0000313|EMBL:BAK67259.1}; EC=4.1.3.27 {ECO:0000313|EMBL:BAK67259.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Anthranilate synthase component I n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ89_9SPHN
trpE; anthranilate synthase component I
SCN18_30_10_14_R1_B_scaffold_2100_14
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14430..15200
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2DK50_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK83297.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2100_15
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15307..16275
DNA (969bp) protein (323aa)
CDF-family cation efflux system protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ90_9SPHN
CDF-family cation efflux system protein
CDF-family cation efflux system protein {ECO:0000313|EMBL:BAK67260.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2100_16
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16343..16840)
DNA (498bp) protein (166aa)
L-asparaginase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ92_9SPHN
L-asparaginase
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
SCN18_30_10_14_R1_B_scaffold_2100_17
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16916..17254
DNA (339bp) protein (113aa)
Para-aminobenzoate synthase {ECO:0000313|EMBL:AJR24875.1}; EC=2.6.1.85 {ECO:0000313|EMBL:AJR24875.1};; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
glutamine amidotransferase of anthranilate synthase (EC:4.1.3.27)
Para-aminobenzoate synthase n=1 Tax=Sphingobium baderi LL03 RepID=T0G8G8_9SPHN
Displaying 17 items

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