name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_2160_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3..824
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Outer membrane receptor protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2G2E0_9SPHN
Outer membrane receptor protein {ECO:0000313|EMBL:EJL23790.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
TonB-dependent receptor
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SCN18_30_10_14_R1_B_scaffold_2160_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1247..2164
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LysR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH8_9SPHN
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:BAK68352.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2730..5018
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Putative S8 family peptidase {ECO:0000313|EMBL:BAK68357.1}; EC=3.4.-.- {ECO:0000313|EMBL:BAK68357.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative S8 family peptidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQI3_9SPHN
putative S8 family peptidase
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SCN18_30_10_14_R1_B_scaffold_2160_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5333..5695)
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Iron-sulfur cluster assembly protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX9_9SPHN
iron-sulfur cluster assembly protein
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:BAK68534.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5708..6196)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68535.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6193..7461)
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Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Cysteine desulfurase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY1_9SPHN
putative selenocysteine lyase
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SCN18_30_10_14_R1_B_scaffold_2160_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7458..8213)
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Iron-sulfur cluster assembly protein SufD n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY2_9SPHN
sufD; iron-sulfur cluster assembly protein SufD
Iron-sulfur cluster assembly protein SufD {ECO:0000313|EMBL:BAK68537.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_8
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8210..8551)
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Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR72_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO96540.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
hypothetical protein
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SCN18_30_10_14_R1_B_scaffold_2160_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8548..9312)
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Iron-sulfur cluster assembly protein SufC n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY4_9SPHN
sufC; iron-sulfur cluster assembly protein SufC
Iron-sulfur cluster assembly protein SufC {ECO:0000313|EMBL:BAK68539.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_10
unknown
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Not on your lists |
comp(9313..9753)
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This feature has no annotations |
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SCN18_30_10_14_R1_B_scaffold_2160_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9833..11308)
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Iron-sulfur cluster assembly protein SufB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY6_9SPHN
sufB; iron-sulfur cluster assembly protein SufB
Iron-sulfur cluster assembly protein SufB {ECO:0000313|EMBL:BAK68541.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11305..11787)
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Rrf2 family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY7_9SPHN
Rrf2 family transcriptional regulator
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:BAK68542.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11993..12871)
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Putative AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY9_9SPHN
putative AraC family transcriptional regulator
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:BAK68544.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2160_14
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13256..14230
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Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRZ0_9SPHN
pyrD; dihydroorotate dehydrogenase
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