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SCN18_30_10_14_R1_B_scaffold_2686

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2686_1
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..650
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000362BDEA
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:EHH11398.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
intradiol ring-cleavage dioxygenase
SCN18_30_10_14_R1_B_scaffold_2686_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(744..1730)
DNA (987bp) protein (329aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK2_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAH56686.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2686_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1877..2809)
DNA (933bp) protein (311aa)
C alpha-dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK1_9SPHN
ligN; C alpha-dehydrogenase
C alpha-dehydrogenase {ECO:0000313|EMBL:BAK68265.1}; Calpha-dehydrogenase {ECO:0000313|EMBL:BAH56685.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2686_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2958..3518)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAH56688.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2686_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3744..5303
DNA (1560bp) protein (520aa)
Hypothetical transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK5_9SPHN
TetR family transcriptional regulator
Hypothetical transcriptional regulator {ECO:0000313|EMBL:BAH56689.1}; TetR family transcriptional regulator {ECO:0000313|EMBL:BAK68261.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2686_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5329..6225)
DNA (897bp) protein (299aa)
Pirin-related protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ86_9SPHN
pirin
Pirin-related protein {ECO:0000313|EMBL:BAK68260.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2686_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6319..7092
DNA (774bp) protein (258aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY68_PSEUX
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEA24690.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_B_scaffold_2686_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7149..8138
DNA (990bp) protein (330aa)
Putative S33 family peptidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ85_9SPHN
Peptidase S33 family protein {ECO:0000313|EMBL:GAO37944.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative S33 family peptidase
SCN18_30_10_14_R1_B_scaffold_2686_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8183..9265)
DNA (1083bp) protein (361aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:BAK68258.1}; EC=2.6.1.42 {ECO:0000313|EMBL:BAK68258.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Branched-chain amino acid aminotransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ84_9SPHN
ilvE; branched-chain amino acid aminotransferase
SCN18_30_10_14_R1_B_scaffold_2686_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9586..10455
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ82_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68256.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2686_11
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10459..11196)
DNA (738bp) protein (246aa)
PREDICTED: uncharacterized pyrophosphatase/phosphodiesterase C725.05c-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15E05
Phosphodiesterase {ECO:0000313|EMBL:KGO98690.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
type I phosphodiesterase/nucleotide pyrophosphatase
SCN18_30_10_14_R1_B_scaffold_2686_12
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11208..11621)
DNA (414bp) protein (138aa)
nucleotide diphosphatase (EC:3.6.1.9)
Putative AP superfamily protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H435_9CAUL
Putative AP superfamily protein {ECO:0000313|EMBL:EJL37585.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCN18_30_10_14_R1_B_scaffold_2686_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11728..12102)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ80_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68254.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2686_14
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12099..12323)
DNA (225bp) protein (75aa)
Molybdopterin biosynthesis protein MoeB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ79_9SPHN
molybdopterin biosynthesis protein MoeB
Molybdopterin biosynthesis protein MoeB {ECO:0000313|EMBL:BAK68253.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 14 items

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