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SCN18_30_10_14_R1_B_scaffold_2836

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2836_1
CN-SCN_Rhodanobacter_45x, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1314
DNA (1314bp) protein (438aa)
Beta-lactamase domain-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP46_9SPHN
mRNA 3'-end processing factor {ECO:0000313|EMBL:KHK93413.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
beta-lactamase domain-containing protein
SCN18_30_10_14_R1_B_scaffold_2836_2
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1311..2822
DNA (1512bp) protein (504aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP45_9SPHN
SCN18_30_10_14_R1_B_scaffold_2836_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2819..3745
DNA (927bp) protein (309aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CCA93196.1}; EC=2.7.6.1 {ECO:0000313|EMBL:CCA93196.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP44_9SPHN
SCN18_30_10_14_R1_B_scaffold_2836_4
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3751..6120
DNA (2370bp) protein (790aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:CCA93195.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CCA93195.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Copper-translocating P-type ATPase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP43_9SPHN
SCN18_30_10_14_R1_B_scaffold_2836_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6133..6372
DNA (240bp) protein (80aa)
UPI0003D5CB1F related cluster n=1 Tax=unknown RepID=UPI0003D5CB1F
Uncharacterized protein {ECO:0000313|EMBL:KHK93410.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2836_6
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6369..6617
DNA (249bp) protein (83aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0GMQ9_9SPHN
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KHK93408.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
protein-S-isoprenylcysteine methyltransferase
SCN18_30_10_14_R1_B_scaffold_2836_7
scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, Plasmid-like

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6633..7001
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HFF0_9SPHN
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KHK93408.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2836_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7096..8484)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5BC75_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM67177.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2836_9
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8553..9698
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SH45_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49907.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_30_10_14_R1_B_scaffold_2836_10
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9679..10299
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI00037A6E11
Uncharacterized protein {ECO:0000313|EMBL:EPR18402.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
nuclease
Displaying 10 items

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