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SCN18_30_10_14_R1_B_scaffold_1624

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_1624_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1777)
DNA (1776bp) protein (592aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRN1_9SPHN
TonB-dependent receptor-like protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCN18_30_10_14_R1_B_scaffold_1624_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1854..3491)
DNA (1638bp) protein (546aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRM9_9SPHN
Putative hydrolase {ECO:0000313|EMBL:KGB58507.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
putative hydrolase
SCN18_30_10_14_R1_B_scaffold_1624_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3811..4848)
DNA (1038bp) protein (346aa)
UPI0003D59EC0 related cluster n=1 Tax=unknown RepID=UPI0003D59EC0
Uncharacterized protein {ECO:0000313|EMBL:KGB58505.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1624_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5256..6107
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMB3_TERRK
Uncharacterized protein {ECO:0000313|EMBL:AHE55828.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1624_5
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6330..8387)
DNA (2058bp) protein (686aa)
phospholipase C, phosphocholine-specific (EC:3.1.4.3)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003612ECB
Phospholipase C, phosphocholine-specific {ECO:0000313|EMBL:EJL38041.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCN18_30_10_14_R1_B_scaffold_1624_6
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8734..11079
DNA (2346bp) protein (782aa)
Outer membrane receptor protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BKL1_9XANT
TonB-dependent receptor {ECO:0000313|EMBL:EZP49107.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
TonB-dependent receptor
SCN18_30_10_14_R1_B_scaffold_1624_7
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11280..11702)
DNA (423bp) protein (141aa)
transposase n=1 Tax=Sphingomonas elodea RepID=UPI00026301F9
putative transposase for insertion sequence element
Strain AB04 contig000056, whole genome shotgun sequence {ECO:0000313|EMBL:KIP19889.1}; TaxID=265546 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus ayderensis.;"
SCN18_30_10_14_R1_B_scaffold_1624_8
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

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comp(12177..12461)
DNA (285bp) protein (95aa)
transposase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488B71
DNA, contig: SP681 {ECO:0000313|EMBL:GAN15914.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
transposase
SCN18_30_10_14_R1_B_scaffold_1624_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12548..13135
DNA (588bp) protein (196aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEL0_9SPHN
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCA90735.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCN18_30_10_14_R1_B_scaffold_1624_10
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13571..14884)
DNA (1314bp) protein (438aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B75CBE
Uncharacterized protein {ECO:0000313|EMBL:KIY42259.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
major facilitator superfamily transporter
SCN18_30_10_14_R1_B_scaffold_1624_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15068..15694
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003820661
HTH-type transcriptional regulator PuuR {ECO:0000313|EMBL:AKH43220.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
transcriptional regulator
SCN18_30_10_14_R1_B_scaffold_1624_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15806..16948
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00038048AB
mandelate racemase/muconate lactonizing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R1_B_scaffold_1624_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17155..19107
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IVA0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE57109.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCN18_30_10_14_R1_B_scaffold_1624_14
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19221..19997
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GMN5_9SPHN
Colicin I receptor {ECO:0000313|EMBL:AKH43219.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TonB-dependent receptor
SCN18_30_10_14_R1_B_scaffold_1624_15
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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20084..20656
DNA (573bp) protein (191aa)
nucleotide pyrophosphatase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036BD1F2
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KFD29949.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
type I phosphodiesterase/nucleotide pyrophosphatase
Displaying 15 items

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