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SCN18_30_10_14_R1_B_scaffold_1625

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_1625_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..414)
DNA (414bp) protein (138aa)
FAD linked oxidase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B1_NOVAD
FAD linked oxidase-like protein {ECO:0000313|EMBL:KHS48690.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
FAD linked oxidase-like protein
SCN18_30_10_14_R1_B_scaffold_1625_2
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(517..2790)
DNA (2274bp) protein (758aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4I4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55107.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
SCN18_30_10_14_R1_B_scaffold_1625_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2971..4110)
DNA (1140bp) protein (380aa)
Amidohydrolase 2 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT60_9BURK
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCN18_30_10_14_R1_B_scaffold_1625_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4164..4613)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQS0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65942.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4711..5448)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQR8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65940.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5523..6446
DNA (924bp) protein (308aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQR7_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK65939.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6991..8286
DNA (1296bp) protein (432aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT1_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK66147.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8317..9117)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00035E51CA
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_30_10_14_R1_B_scaffold_1625_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9392..11029
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631034
TIR protein {ECO:0000313|EMBL:EGF89586.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1625_10
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11102..11911)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000367DAAE
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCN18_30_10_14_R1_B_scaffold_1625_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11956..13815)
DNA (1860bp) protein (620aa)
Putative M2 family peptidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIB7_9SPHN
Putative M2 family peptidase {ECO:0000313|EMBL:BAK67040.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
putative M2 family peptidase
SCN18_30_10_14_R1_B_scaffold_1625_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13874..14632)
DNA (759bp) protein (253aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIB8_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK67041.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14751..15221
DNA (471bp) protein (157aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIB9_9SPHN
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAK67042.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_14
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15214..16293
DNA (1080bp) protein (360aa)
Multidrug resistance protein A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIC0_9SPHN
multidrug resistance protein A
Multidrug resistance protein A {ECO:0000313|EMBL:BAK67043.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_15
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16305..17843
DNA (1539bp) protein (513aa)
Multidrug resistance protein B n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIC1_9SPHN
multidrug resistance protein B
Multidrug resistance protein B {ECO:0000313|EMBL:BAK67044.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1625_16
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18053..18754
DNA (702bp) protein (234aa)
Acetyltransferase n=1 Tax=Burkholderia pseudomallei Pasteur 52237 RepID=A8HKL6_BURPE
acyltransferase family protein
Acyltransferase family protein {ECO:0000313|EMBL:KGC15347.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
SCN18_30_10_14_R1_B_scaffold_1625_17
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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18699..19139
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=C5B4B2_METEA
hypothetical protein
Acyltransferase 3 {ECO:0000313|EMBL:EHP94503.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
Displaying 17 items

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