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SCN18_25_8_15_R5_B_scaffold_20

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Displaying items 1-30 of 799 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R5_B_scaffold_20_trna_3
unknown

Not on your lists

comp(2128..2200)
DNA (73bp)
transferRNA Ala
SCN18_25_8_15_R5_B_scaffold_20_trna_2
unknown

Not on your lists

comp(2233..2306)
DNA (74bp)
transferRNA Ile
SCN18_25_8_15_R5_B_scaffold_20_16S_1
unknown

Not on your lists

comp(2464..4005)
DNA (1542bp)
16S ribosomal RNA (16S rRNA)
SCN18_25_8_15_R5_B_scaffold_20_1
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4418..4888
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC04_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV29350.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_20_2
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4792..5052)
DNA (261bp) protein (87aa)
SCN18_25_8_15_R5_B_scaffold_20_3
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5158..5355)
DNA (198bp) protein (66aa)
rubredoxin n=1 Tax=Dyella japonica RepID=UPI0002FFFBA0
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
rubredoxin
SCN18_25_8_15_R5_B_scaffold_20_4
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5448..6104
DNA (657bp) protein (219aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000367D53B
thiamine-phosphate synthase
SCN18_25_8_15_R5_B_scaffold_20_5
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6101..7471
DNA (1371bp) protein (457aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde-2,1-aminomutase n=1 Tax=mine drainage metagenome RepID=T0ZVV8_9ZZZZ
SCN18_25_8_15_R5_B_scaffold_20_6
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7479..7901)
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Dyella ginsengisoli RepID=UPI000349F38D
Glyoxalase {ECO:0000313|EMBL:GAN44915.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lactoylglutathione lyase-like lyase
SCN18_25_8_15_R5_B_scaffold_20_7
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7989..9107
DNA (1119bp) protein (373aa)
cystathionine gamma-synthase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36B01
Uncharacterized protein {ECO:0000313|EMBL:KFN42469.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
SCN18_25_8_15_R5_B_scaffold_20_8
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9407..9937
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SK74_STRM5
Uncharacterized protein {ECO:0000313|EMBL:KGI76647.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_20_9
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9949..10584
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F66A9D
Uncharacterized protein {ECO:0000313|EMBL:KGI76648.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_20_10
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10611..11774
DNA (1164bp) protein (388aa)
adhesin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F90F8
Adhesin {ECO:0000313|EMBL:AHY58244.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Large exoproteins involved in heme utilization or adhesion
SCN18_25_8_15_R5_B_scaffold_20_11
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11877..12587
DNA (711bp) protein (237aa)
Bacteriocin resistance protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TLK0_STEMA
Peptidase {ECO:0000313|EMBL:KGI76649.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
peptidase C39 bacteriocin processing
SCN18_25_8_15_R5_B_scaffold_20_12
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12606..13421
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00038238BA
NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96216.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_20_13
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13516..14898
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EWR0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KKD57279.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_20_14
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14907..16430)
DNA (1524bp) protein (508aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=mine drainage metagenome RepID=T1B892_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGI76808.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Fis family transcriptional regulator
SCN18_25_8_15_R5_B_scaffold_20_15
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16541..17254)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DB0FBC
Uncharacterized protein {ECO:0000313|EMBL:KGM54583.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
transcriptional regulator
SCN18_25_8_15_R5_B_scaffold_20_16
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17273..17935)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DDA729
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX15316.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCN18_25_8_15_R5_B_scaffold_20_17
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18071..18661)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003478DA2
Peptidase S16 {ECO:0000313|EMBL:GAN44917.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
peptidase S16
SCN18_25_8_15_R5_B_scaffold_20_18
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18671..20122)
DNA (1452bp) protein (484aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W390_9GAMM
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000313|EMBL:EIL93931.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
SCN18_25_8_15_R5_B_scaffold_20_19
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20179..20673)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN44919.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCN18_25_8_15_R5_B_scaffold_20_20
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20742..21311)
DNA (570bp) protein (190aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
adenylate kinase-like kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ1_9GAMM
SCN18_25_8_15_R5_B_scaffold_20_21
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21426..22712
DNA (1287bp) protein (429aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
6-phosphofructokinase n=1 Tax=Dyella japonica RepID=UPI00030CD132
SCN18_25_8_15_R5_B_scaffold_20_22
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22801..23625)
DNA (825bp) protein (275aa)
2-methylisocitrate lyase n=1 Tax=Variovorax paradoxus RepID=UPI000367FA0F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99220.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R5_B_scaffold_20_23
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23785..25869
DNA (2085bp) protein (695aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hppA; pyrophosphatase (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EDD2D
SCN18_25_8_15_R5_B_scaffold_20_24
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26009..28132
DNA (2124bp) protein (708aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDF8_9GAMM
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL97499.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
serine protease, S9A family peptidase
SCN18_25_8_15_R5_B_scaffold_20_25
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28179..28652)
DNA (474bp) protein (158aa)
Sugar-specific transcriptional regulator, TrmB family n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3VAA2_9LEPT
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EPG73390.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
MarR family transcriptional regulator
SCN18_25_8_15_R5_B_scaffold_20_26
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28714..29958
DNA (1245bp) protein (415aa)
monooxygenase (EC:1.14.13.-)
Salicylate hydroxylase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAH7_9BRAD
Monooxygenase {ECO:0000313|EMBL:KJC35979.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCN18_25_8_15_R5_B_scaffold_20_27
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29987..30535
DNA (549bp) protein (183aa)
inorganic pyrophosphatase (EC:3.6.1.1)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DEA77
Tax=GWF1_Xanthomonadales_69_6_curated
Displaying items 1-30 of 799 in total

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