ggKbase home page

SCN18_10_11_15_R5_B_scaffold_487

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R5_B_scaffold_487_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298..972)
DNA (675bp) protein (225aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Octanoyltransferase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YHM8_9BRAD
lipB; lipoate-protein ligase B
SCN18_10_11_15_R5_B_scaffold_487_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1056..1298
DNA (243bp) protein (81aa)
Surface presentation of antigens (SPOA) protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA76_9BRAD
Flagellar motor switch protein FliN {ECO:0000313|EMBL:CEJ12665.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_487_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1366..1863)
DNA (498bp) protein (166aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Putative Holliday junction resolvase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX15_PARL1
Holliday junction resolvase YqgF
SCN18_10_11_15_R5_B_scaffold_487_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1965..2663
DNA (699bp) protein (233aa)
UPF0173 metal-dependent hydrolase M446_4343 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=Y4343_METS4
UPF0173 metal-dependent hydrolase BN1110_02967 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
beta-lactamase domain-containing protein
SCN18_10_11_15_R5_B_scaffold_487_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2972..3604)
DNA (633bp) protein (211aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
folE2; GTP cyclohydrolase 1 (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QQS2_METSZ
SCN18_10_11_15_R5_B_scaffold_487_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3812..4288
DNA (477bp) protein (159aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07P47_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:CEJ12669.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
NifU domain-containing protein
SCN18_10_11_15_R5_B_scaffold_487_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4564..5715)
DNA (1152bp) protein (384aa)
FAD dependent oxidoreductase TIGR03364 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWT5_POLGS
Putative FAD-binding dehydrogenase {ECO:0000313|EMBL:CEJ12671.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
FAD dependent oxidoreductase
SCN18_10_11_15_R5_B_scaffold_487_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5757..6155
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000367136C
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_487_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6143..6925)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDW3_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CEJ12673.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_487_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7069..9036
DNA (1968bp) protein (656aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Threonine--tRNA ligase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LFV2_9RHOB
threonyl-tRNA synthetase
SCN18_10_11_15_R5_B_scaffold_487_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9395..10462)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFT9_XANP2
Uncharacterized protein {ECO:0000313|EMBL:CEJ12675.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_487_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10676..11254
DNA (579bp) protein (193aa)
Nitroreductase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKG0_METNO
Putative NAD(P)H nitroreductase YdjA {ECO:0000313|EMBL:CEJ12676.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
nitroreductase
SCN18_10_11_15_R5_B_scaffold_487_13
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11259..11891
DNA (633bp) protein (211aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Y7_9RHIZ
Flavin reductase like domain protein {ECO:0000313|EMBL:CEJ12677.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
flavin reductase domain-containing protein
SCN18_10_11_15_R5_B_scaffold_487_14
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12006..12749)
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7I5_9RHIZ
Dehydrogenase {ECO:0000313|EMBL:KDP72931.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
oxidoreductase
SCN18_10_11_15_R5_B_scaffold_487_15
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12849..13745
DNA (897bp) protein (299aa)
AraC family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7I6_9RHIZ
AraC family transcriptional regulator {ECO:0000313|EMBL:EHH12308.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
AraC family transcriptional regulator
SCN18_10_11_15_R5_B_scaffold_487_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13861..14730)
DNA (870bp) protein (290aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodovulum sp. PH10 RepID=J6IZ34_9RHOB
(3S)-malyl-CoA thioesterase {ECO:0000313|EMBL:CEJ12678.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
HpcH/HpaI aldolase
SCN18_10_11_15_R5_B_scaffold_487_17
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14734..15228)
DNA (495bp) protein (165aa)
Acyl dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW77_9RHIZ
Bifunctional protein PaaZ {ECO:0000313|EMBL:CEJ12679.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
MaoC domain-containing protein dehydratase
SCN18_10_11_15_R5_B_scaffold_487_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15325..16392
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000372B910
Uncharacterized protein {ECO:0000313|EMBL:CEJ12680.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_487_19
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16508..17701
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PN74_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CEJ12682.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_487_20
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17797..18366)
DNA (570bp) protein (190aa)
Hpt domain protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UJ73_9RHOB
Hpt domain protein {ECO:0000313|EMBL:CEJ12685.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Hpt protein
SCN18_10_11_15_R5_B_scaffold_487_21
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18378..18923)
DNA (546bp) protein (182aa)
Chemotaxis protein CheYIII n=1 Tax=Rhodovulum sp. PH10 RepID=J6LLU1_9RHOB
Chemotaxis protein CheY {ECO:0000313|EMBL:CEJ12686.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
chemotaxis protein CheY
SCN18_10_11_15_R5_B_scaffold_487_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18997..19779)
DNA (783bp) protein (261aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000301A8A6
SCN18_10_11_15_R5_B_scaffold_487_23
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19932..20678)
DNA (747bp) protein (249aa)
3-oxoacyl-ACP reductase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036963F0
Putative oxidoreductase {ECO:0000313|EMBL:CEJ12688.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
SCN18_10_11_15_R5_B_scaffold_487_24
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20801..22828)
DNA (2028bp) protein (676aa)
TonB-denpendent receptor n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBD0_9RHIZ
Vitamin B12 transporter BtuB {ECO:0000313|EMBL:CEJ12689.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
TonB-denpendent receptor
SCN18_10_11_15_R5_B_scaffold_487_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23292..24194)
DNA (903bp) protein (301aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW80_9RHIZ
Putative quorum-quenching lactonase YtnP {ECO:0000313|EMBL:CEJ12690.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
beta-lactamase domain-containing protein
SCN18_10_11_15_R5_B_scaffold_487_trna_1
unknown

Not on your lists

comp(24455..24535)
DNA (81bp)
transferRNA Thr
SCN18_10_11_15_R5_B_scaffold_487_26
bacterium YEK0313, Bacteria

Not on your lists

comp(24709..24957)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ12698.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_487_27
bacterium YEK0313, Bacteria

Not on your lists

comp(25046..25294)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ12696.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_487_28
bacterium YEK0313, Bacteria

Not on your lists

comp(25375..25608)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ12697.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_487_29
bacterium YEK0313, Bacteria

Not on your lists

comp(26152..26376)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ12697.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying items 1-30 of 32 in total

View Taxonomy