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SCN18_31_3_15_R4_B_scaffold_1440

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1440_1
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(145..2361)
DNA (2217bp) protein (739aa)
Putative membrane protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2Q4_9FLAO
Putative membrane protein {ECO:0000313|EMBL:ESU20547.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_2
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2563..3150
DNA (588bp) protein (196aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S6T3_9FLAO
SCN18_31_3_15_R4_B_scaffold_1440_3
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3211..3645
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000364E5DC
Uncharacterized protein {ECO:0000313|EMBL:KGO84952.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_4
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3719..4492
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SP97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU26225.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_5
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4494..4811
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SC15_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU24019.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
antibiotic biosynthesis monooxygenase
SCN18_31_3_15_R4_B_scaffold_1440_6
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4826..5962
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SBF9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU24018.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_7
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6040..7278)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CP42_9FLAO
beta-ketoacyl-acyl-carrier protein synthase II
SCN18_31_3_15_R4_B_scaffold_1440_8
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7329..7874)
DNA (546bp) protein (182aa)
Transcriptional regulator, TetR family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBG8_9PORP
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDS42415.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
TetR family transcriptional regulator
SCN18_31_3_15_R4_B_scaffold_1440_9
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7977..8411)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000370C383
Thioesterase {ECO:0000313|EMBL:KGO87267.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_10
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8430..9608)
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGO79313.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGO79313.1};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Probable acetyl-CoA acetyltransferase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZY1_FLAPJ
SCN18_31_3_15_R4_B_scaffold_1440_11
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9653..10237)
DNA (585bp) protein (195aa)
Predicted transcriptional regulator, TetR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEH4_FLAJ1
Strain DSM 12611 Contig12, whole genome shotgun sequence {ECO:0000313|EMBL:KIO52009.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
TetR family transcriptional regulator
SCN18_31_3_15_R4_B_scaffold_1440_12
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10364..10966
DNA (603bp) protein (201aa)
Transferase, LpxA family n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J5E3_CYCMS
LpxA family transferase
LpxA family transferase {ECO:0000313|EMBL:AKD01884.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCN18_31_3_15_R4_B_scaffold_1440_13
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11001..11615)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5F362
Uncharacterized protein {ECO:0000313|EMBL:KGO86208.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_14
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(11615..12223)
DNA (609bp) protein (203aa)
50S ribosomal protein L19 n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U877_CROAH
Uncharacterized protein {ECO:0000313|EMBL:KGO86208.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_15
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12223..12834)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B766EF
Uncharacterized protein {ECO:0000313|EMBL:KGO86208.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_16
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12834..13439)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5F362
Uncharacterized protein {ECO:0000313|EMBL:KGO86208.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_17
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13439..14053)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5F362
Uncharacterized protein {ECO:0000313|EMBL:KGO86208.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1440_18
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14061..14678)
DNA (618bp) protein (206aa)
Displaying 18 items

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