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SCN18_26_2_15_R5_B_scaffold_1143

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1143_1
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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216..1025
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036E3C3F
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL92696.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
extracellular solute-binding protein
SCN18_26_2_15_R5_B_scaffold_1143_2
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1049..1708
DNA (660bp) protein (220aa)
Amino acid ABC transporter membrane protein 1, PAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127B0_POLSJ
amino acid ABC transporter permease
Amino acid ABC transporter membrane protein 1, PAAT family {ECO:0000313|EMBL:ABE45382.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCN18_26_2_15_R5_B_scaffold_1143_3
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1705..2358
DNA (654bp) protein (218aa)
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein id=5080458 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
amino acid ABC transporter permease
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_26_2_15_R5_B_scaffold_1143_4
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2342..3076
DNA (735bp) protein (245aa)
Phosphate ABC transporter ATP-binding protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KSY8_9BURK
Phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGI77207.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
amino acid ABC transporter, ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_1143_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3107..4219)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CE3_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD85943.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_26_2_15_R5_B_scaffold_1143_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4331..4714
DNA (384bp) protein (128aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1143_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4744..7326)
DNA (2583bp) protein (861aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBF6_MESOW
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:AEH87703.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_26_2_15_R5_B_scaffold_1143_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7435..8586)
DNA (1152bp) protein (384aa)
UPI0003CE8EE2 related cluster n=1 Tax=unknown RepID=UPI0003CE8EE2
LuxR family transcriptional regulator {ECO:0000313|EMBL:ESY21001.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
LuxR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_1143_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8674..9228)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KFX1_9GAMM
activator of Hsp90 ATPase family protein 3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1143_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9225..9578)
DNA (354bp) protein (118aa)
Putative ArsR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MUJ8_BORBM
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1143_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9633..10052)
DNA (420bp) protein (140aa)
Glyoxalase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3I0_9PROT
lactoylglutathione lyase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1143_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10247..11398
DNA (1152bp) protein (384aa)
alpha/beta hydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EA76F6
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46837.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
epoxide hydrolase
SCN18_26_2_15_R5_B_scaffold_1143_13
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11411..12097
DNA (687bp) protein (229aa)
Beta-lactamase domain-containing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6W0_STAND
beta-lactamase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 13 items

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