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SCN18_26_2_15_R5_B_scaffold_1230

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1230_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18..833)
DNA (816bp) protein (272aa)
Putative ABC spermidine/putrescine transporter permease protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S8A3_9BRAD
Putative ABC spermidine/putrescine transporter permease protein {ECO:0000313|EMBL:CCD90430.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
ABC spermidine/putrescine transporter permease
SCN18_26_2_15_R5_B_scaffold_1230_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(830..1702)
DNA (873bp) protein (291aa)
Putative ABC spermidine/putrescine transporter permease protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YPY9_BRASO
ABC spermidine/putrescine transporter permease
Putative ABC spermidine/putrescine transporter permease protein {ECO:0000313|EMBL:CCE09511.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
SCN18_26_2_15_R5_B_scaffold_1230_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1699..3240)
DNA (1542bp) protein (514aa)
hydantoinase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000371D9A8
hyuA; hydantoinase A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1230_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3237..4319)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZY79_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1230_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4316..5395)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZY79_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1230_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5596..6546
DNA (951bp) protein (317aa)
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11H78_MESSB
Tetrathionate response regulatory protein TtrR {ECO:0000313|EMBL:CEJ13151.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LuxR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_1230_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6618..7664)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A9F13
Sugar ABC transporter permease {ECO:0000313|EMBL:EWY41720.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
sugar ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_1230_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7669..9198)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EE3FB
D-ribose transporter ATP binding protein {ECO:0000313|EMBL:KJB94512.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
sugar ABC transporter ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_1230_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9271..10230)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003670070
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJB94511.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
sugar ABC transporter substrate-binding protein
SCN18_26_2_15_R5_B_scaffold_1230_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10370..10927)
DNA (558bp) protein (186aa)
bphE; biphenyl dioxygenase subunit beta (EC:1.14.12.18)
Biphenyl dioxygenase subunit beta {ECO:0000313|EMBL:AIO32688.1}; EC=1.14.12.18 {ECO:0000313|EMBL:AIO32688.1};; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI0003737069
SCN18_26_2_15_R5_B_scaffold_1230_11
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10930..11253)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NC22_9ACTO
ring hydroxylating alpha subunit family protein
Ring hydroxylating alpha subunit family protein {ECO:0000313|EMBL:AIO32864.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
Displaying 11 items

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