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SCN18_26_2_15_R5_B_scaffold_1318

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1318_1
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..481
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HLY1_9CAUL
3-oxoacyl-ACP reductase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_26_2_15_R5_B_scaffold_1318_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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581..1030
DNA (450bp) protein (150aa)
methionine sulfoxide reductase B (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SJZ9_9SPHN
SCN18_26_2_15_R5_B_scaffold_1318_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1079..2038)
DNA (960bp) protein (320aa)
fructokinase (EC:2.7.1.4)
Sugar kinase, ribokinase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QBW5_9BRAD
Sugar kinase, ribokinase {ECO:0000313|EMBL:EIG57271.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCN18_26_2_15_R5_B_scaffold_1318_4
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2047..3714)
DNA (1668bp) protein (556aa)
Putative sugar kinase (Ribulo-/ribitol kinase) {ECO:0000313|EMBL:CCD98578.1}; EC=2.7.1.16 {ECO:0000313|EMBL:CCD98578.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Putative sugar kinase (Ribulo-/ribitol kinase) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SWK1_9BRAD
ribulokinase
SCN18_26_2_15_R5_B_scaffold_1318_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3758..4531)
DNA (774bp) protein (258aa)
Oxidoreductase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QA5_BRADU
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:BAC48490.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCN18_26_2_15_R5_B_scaffold_1318_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4541..5545)
DNA (1005bp) protein (335aa)
Putative ABC transporter, ATP-binding protein carbohydrate transporter (Maltose malK-like) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TR12_9BRAD
Putative ABC transporter, ATP-binding protein carbohydrate transporter (Maltose malK-like) {ECO:0000313|EMBL:CCE08900.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
putative ABC transporter ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_1318_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5558..6388)
DNA (831bp) protein (277aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DRM8_BRAJP
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49544.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_1318_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6390..7262)
DNA (873bp) protein (291aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DRM9_BRAJP
sugar ABC transporter permease
ABC transporter permease protein {ECO:0000313|EMBL:AHY51852.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCN18_26_2_15_R5_B_scaffold_1318_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7405..8715)
DNA (1311bp) protein (437aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YFS4_9BRAD
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EHR02382.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
putative ABC transporter
SCN18_26_2_15_R5_B_scaffold_1318_10
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8810..9763)
DNA (954bp) protein (318aa)
DeoR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030EE1FF
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KJC40466.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_1318_11
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9778..10422)
DNA (645bp) protein (215aa)
hydrolase phosphatase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000376683D
Hydrolase {ECO:0000313|EMBL:KJC40467.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hydrolase
Displaying 11 items

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