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SCN18_26_2_15_R5_B_scaffold_1518

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1518_1
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182..1990)
DNA (1809bp) protein (603aa)
Cyclohexanone monooxygenase {ECO:0000313|EMBL:ABS63242.1}; EC=1.14.13.22 {ECO:0000313|EMBL:ABS63242.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Cyclohexanone monooxygenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTK9_PARL1
cyclohexanone monooxygenase
SCN18_26_2_15_R5_B_scaffold_1518_2
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2349..3047
DNA (699bp) protein (233aa)
Pirin-related protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNC2_SINAD
Pirin {ECO:0000313|EMBL:AIA11757.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Pirin-like protein
SCN18_26_2_15_R5_B_scaffold_1518_3
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3196..4155)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUV0_HALO1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1518_4
unknown

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comp(4139..4420)
DNA (282bp) protein (94aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_1518_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4861..5181)
DNA (321bp) protein (107aa)
Oxidoreductase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBX5_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:ESX66265.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
short-chain dehydrogenase
SCN18_26_2_15_R5_B_scaffold_1518_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5291..8653)
DNA (3363bp) protein (1121aa)
Adenylate cyclase / Guanylate cyclase {ECO:0000313|EMBL:CDY78534.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CDY78534.1};; EC=4.6.1.2 {ECO:0000313|EMBL:CDY78534.1};; Guanylate cyclase {ECO:0000313|EMBL:KDR38194.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037AB039
adenylate/guanylate cyclase
SCN18_26_2_15_R5_B_scaffold_1518_7
unknown

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8920..9102
DNA (183bp) protein (61aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_1518_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9613..10785
DNA (1173bp) protein (391aa)
Glycosyltransferase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1G3_9PROT
glycosyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1518_9
unknown

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11511..12059
DNA (549bp) protein (183aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_1518_10
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12392..13387
DNA (996bp) protein (332aa)
C4-dicarboxylate-binding protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H5R0_CAUCN
C4-dicarboxylate-binding protein
TRAP dicarboxylate transporter, DctP subunit family {ECO:0000313|EMBL:AAK23427.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCN18_26_2_15_R5_B_scaffold_1518_11
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14157..15308
DNA (1152bp) protein (384aa)
LuxR family transcriptional regulator n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AMN1_BURGB
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:ACR31082.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
SCN18_26_2_15_R5_B_scaffold_1518_12
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15351..16166)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030C0A23
Transcriptional regulatory protein LysR family protein {ECO:0000313|EMBL:KFC72164.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_1518_13
unknown

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16402..16488
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 13 items

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