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SCN18_26_2_15_R5_B_scaffold_73

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Displaying items 1-30 of 172 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_73_1
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

comp(143..2728)
DNA (2586bp) protein (862aa)
UPI0003CEE418 related cluster n=1 Tax=unknown RepID=UPI0003CEE418
Methylase {ECO:0000313|EMBL:ESY71796.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
methylase/helicase
SCN18_26_2_15_R5_B_scaffold_73_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2942..5071)
DNA (2130bp) protein (710aa)
ParB domain-containing protein nuclease n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9V5_9RHIZ
ParB domain-containing protein nuclease
ParB domain-containing protein nuclease {ECO:0000313|EMBL:AGK59803.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R5_B_scaffold_73_3
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(5147..6628)
DNA (1482bp) protein (494aa)
ID466 n=1 Tax=Bradyrhizobium japonicum RepID=Q9AN79_BRAJP
exonuclease SbcC
SbcC exonuclease {ECO:0000313|EMBL:CAD89361.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCN18_26_2_15_R5_B_scaffold_73_4
unknown

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6706..7017
DNA (312bp) protein (104aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_73_5
unknown

Not on your lists

7108..7230
DNA (123bp) protein (41aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_73_6
unknown

Not on your lists

7351..7464
DNA (114bp) protein (38aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037A838C
SCN18_26_2_15_R5_B_scaffold_73_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7548..7997)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VEG4_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC71696.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_73_8
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

comp(8746..9849)
DNA (1104bp) protein (368aa)
Exodeoxyribonuclease I {ECO:0000313|EMBL:EFI53103.1}; EC=3.1.11.1 {ECO:0000313|EMBL:EFI53103.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
exodeoxyribonuclease I n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B9C88
exodeoxyribonuclease I
SCN18_26_2_15_R5_B_scaffold_73_9
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

comp(10168..10695)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V074_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53104.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_73_10
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

comp(10692..11045)
DNA (354bp) protein (118aa)
Transcriptional regulator, XRE family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V075_9BRAD
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFI53105.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
XRE family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_73_11
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

11211..11432
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VTF6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN03450.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_73_12
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11514..12767
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Bradyrhizobium RepID=G7DBK7_BRAJP
hypothetical protein
Blr0072 protein {ECO:0000313|EMBL:BAC45337.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCN18_26_2_15_R5_B_scaffold_73_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13019..13225
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Bradyrhizobium RepID=G7DBK8_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHS42602.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
SCN18_26_2_15_R5_B_scaffold_73_14
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

13218..14345
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DBK9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL05379.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_26_2_15_R5_B_scaffold_73_trna_2
unknown

Not on your lists

comp(14694..14765)
DNA (72bp)
transferRNA Gly
SCN18_26_2_15_R5_B_scaffold_73_15
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14847..15722)
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMC5_9FIRM
rfbA; glucose-1-phosphate thymidylyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15736..16227
DNA (492bp) protein (164aa)
DNA-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B46EFF
conserved protein of unknown function; YbaK/prolyl-tRNA synthetase associated domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_17
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16245..17141
DNA (897bp) protein (299aa)
metal ABC transporter substrate-binding protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI00030408AB
Mn2+/Zn2+ ABC transporter periplasmic protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_18
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17150..18052)
DNA (903bp) protein (301aa)
Bifunctional protein FolD n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=FOLD_AZOC5
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_19
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18045..18236)
DNA (192bp) protein (64aa)
UPF0235 protein PHAMO_30082 n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FU88_PHAMO
UPF0235 protein PHAMO_30082 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
yggU; hypothetical protein
SCN18_26_2_15_R5_B_scaffold_73_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18366..18659)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEJ0_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_21
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18739..19398)
DNA (660bp) protein (220aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_22
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19401..19655)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000379A819
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_23
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19702..20094)
DNA (393bp) protein (131aa)
endoribonuclease L-PSP; K07567 TdcF protein id=17050633 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
endoribonuclease L-PSP
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_trna_1
unknown

Not on your lists

20209..20281
DNA (73bp)
transferRNA Ala
SCN18_26_2_15_R5_B_scaffold_73_24
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

20478..21029
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BS78_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_25
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21036..22241)
DNA (1206bp) protein (402aa)
Putative Transmembrane efflux protein of the MFS type n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IEL1_BORPD
transmembrane efflux protein of the MFS type
Putative Transmembrane efflux protein of the MFS type {ECO:0000313|EMBL:CAP41771.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_26_2_15_R5_B_scaffold_73_26
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22348..22947
DNA (600bp) protein (200aa)
Complete genome; segment 4/17 n=1 Tax=Photorhabdus luminescens subsp. laumondii (strain TT01) RepID=Q7N800_PHOLL
hypothetical protein
Complete genome; segment 4/17 {ECO:0000313|EMBL:CAE13244.1}; TaxID=243265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus luminescens subsp. laumondii (strain TT01).;"
SCN18_26_2_15_R5_B_scaffold_73_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23026..23682
DNA (657bp) protein (219aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_73_28
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23745..24812)
DNA (1068bp) protein (356aa)
P-aminobenzoate N-oxygenase AurF n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002DE96C4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 172 in total

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