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SCN18_26_2_15_R5_B_scaffold_378

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_378_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)
hypothetical protein
Putative uncharacterized protein id=3171133 bin=GWC2_Pelobacter_58_13 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292..462)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00036D440A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(535..816)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000369DA7C
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(831..1907)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002D4CCDD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_5
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(1968..2882)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QYA8_RALPI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_6
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2896..3984)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000378BE04
msuD; methanesulfonate sulfonatase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4165..5049)
DNA (885bp) protein (295aa)
transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035E79DC
Uncharacterized protein {ECO:0000313|EMBL:EJZ32552.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
LysR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_378_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5293..6288)
DNA (996bp) protein (332aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003769BC4
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABE41122.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_26_2_15_R5_B_scaffold_378_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6396..8009
DNA (1614bp) protein (538aa)
Probable gamma-glutamyltranspeptidase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW31_9PROT
gamma-glutamyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..9848)
DNA (1563bp) protein (521aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_26_2_15_R5_B_scaffold_378_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10021..11616
DNA (1596bp) protein (532aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003694D50
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC37411.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ABC transporter substrate-binding protein
SCN18_26_2_15_R5_B_scaffold_378_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11715..12650
DNA (936bp) protein (312aa)
Glutathione transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HLB2_9BRAD
Glutathione transport system permease {ECO:0000313|EMBL:ERF85598.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_378_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12647..13501
DNA (855bp) protein (285aa)
Peptide/nickel transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6Z3_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43850.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_378_14
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13510..14487
DNA (978bp) protein (326aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89KL2_BRADU
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAR62751.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCN18_26_2_15_R5_B_scaffold_378_15
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14480..15457
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAV1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44260.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_378_16
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15473..16687
DNA (1215bp) protein (405aa)
Adenylate/guanylate cyclase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ61_9RHIZ
adenylate/guanylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_17
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16756..17247
DNA (492bp) protein (164aa)
Putative DNA protection during starvation or oxydative stress transcription regulator protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMA5_METPP
DNA protection during starvation or oxydative stress transcription regulator protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17378..18703
DNA (1326bp) protein (442aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4M5_9PROT
sugar ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18815..19684
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD8_BRAJP
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_20
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19710..20561
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD9_BRAJP
sugar ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_21
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20581..21675
DNA (1095bp) protein (365aa)
Glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNS1_BRAJP
glycerol-3-phosphate ABC transporter ATP-binding protein
Glycerol-3-phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL13984.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_26_2_15_R5_B_scaffold_378_22
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21920..22540
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00038249DB
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ACK49839.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_26_2_15_R5_B_scaffold_378_23
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22549..23133
DNA (585bp) protein (195aa)
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhizobium giardinii RepID=UPI000370117F
Putative methylated-DNA-protein-cystein methyltransferase (6-O-methylguanine-DNA methyltransferase)
Putative methylated-DNA-protein-cystein methyltransferase (6-O-methylguanine-DNA methyltransferase) {ECO:0000313|EMBL:CDN56738.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_26_2_15_R5_B_scaffold_378_24
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23236..23883
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6D2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX54397.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_378_25
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24084..24782)
DNA (699bp) protein (233aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKL3_AFIFE
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EKS28100.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_378_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24805..25665)
DNA (861bp) protein (287aa)
Acid phosphatase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA06_AZOL4
acid phosphatase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_27
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25662..26636)
DNA (975bp) protein (325aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2KZ71_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_28
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(26633..27445)
DNA (813bp) protein (271aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2T0_POLGS
phytanoyl-CoA dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_29
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27442..28761)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031A8528
thymidine phosphorylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_378_30
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28767..29570)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-E13 RepID=UPI00035EF63C
purine nucleotide phosphorylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 39 in total

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