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SCN18_26_2_15_R5_B_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_388_1
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..762
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000374333E
outer membrane autotransporter barrel protein
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EIM26346.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCN18_26_2_15_R5_B_scaffold_388_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

985..1245
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000374333E
autotransporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_3
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1331..2581
DNA (1251bp) protein (417aa)
Periplasmic protein-like protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QH14_RHOPT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2599..4212
DNA (1614bp) protein (538aa)
Acetyl-CoA synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0D4_9PROT
acetyl-coenzyme A synthetase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_5
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4242..5222
DNA (981bp) protein (327aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BXB8_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD46167.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCN18_26_2_15_R5_B_scaffold_388_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5236..6321
DNA (1086bp) protein (362aa)
hypothetical protein id=14626596 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6332..6610
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00035ED985
selenoprotein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6674..6853
DNA (180bp) protein (60aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_9
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6904..8658)
DNA (1755bp) protein (585aa)
ATP-binding cassette subfamily B n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NX31_AZOS1
ATP-binding cassette subfamily B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_10
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8655..8960)
DNA (306bp) protein (102aa)
Protein CyaY n=1 Tax=uncultured Rhodospirillales bacterium HF4000_38H21 RepID=E7C8H5_9PROT
putative frataxin, iron-binding and oxidizing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_11
Candidatus Caedibacter acanthamoebae_SCNPILOT_EXPT_500_P_Alphaproteobacteria_36_9_partial, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9091..9381
DNA (291bp) protein (97aa)
50S ribosomal protein L31 n=1 Tax=Bartonella birtlesii LL-WM9 RepID=J0YNV3_9RHIZ
50S ribosomal protein L31
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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9445..11481
DNA (2037bp) protein (679aa)
Putative molybdopterin oxidoreductase id=2985452 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11485..11895)
DNA (411bp) protein (137aa)
Ketosteroid isomerase-like protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ASI1_9CAUL
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:EJL36474.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCN18_26_2_15_R5_B_scaffold_388_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11975..12286)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ87_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE06525.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_388_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12473..13111
DNA (639bp) protein (213aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
bioD; ATP-dependent dethiobiotin synthetase BioD (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3G0_9RHIZ
SCN18_26_2_15_R5_B_scaffold_388_16
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13108..14385
DNA (1278bp) protein (426aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3G1_9RHIZ
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EIM30753.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCN18_26_2_15_R5_B_scaffold_388_17
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

comp(14408..15880)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000345CCF6
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_18
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15877..17274)
DNA (1398bp) protein (466aa)
Major facilitator superfamily transporter n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QD11_9PSED
Putative multidrug-efflux transporter/MT1670 {ECO:0000313|EMBL:CEJ14808.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
major facilitator superfamily transporter
SCN18_26_2_15_R5_B_scaffold_388_19
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17393..18022
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLZ5_9PROT
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47164.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_388_20
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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18103..19161
DNA (1059bp) protein (353aa)
DNA-3-methyladenine glycosylase II/transcriptional regulator Ada/DNA-O6-methylguanine--protein-cysteine S-methyltransferase (EC:2.1.1.63 3.2.2.21)
DNA-3-methyladenine glycosylase II / Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase {ECO:0000313|EMBL:ABJ84968.1}; EC=2.1.1.63 {ECO:0000313|EMBL:ABJ84968.1};; EC=3.2.2.21 {ECO:0000313|EMBL:ABJ84968.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
AraC family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003617DBB
SCN18_26_2_15_R5_B_scaffold_388_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19154..19684
DNA (531bp) protein (177aa)
Methylated-DNA--protein-cysteine methyltransferase n=3 Tax=Serratia marcescens RepID=L7ZMB6_SERMA
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:AKF80481.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
ogt; O6-methylguanine-DNA-alkyltransferase
SCN18_26_2_15_R5_B_scaffold_388_22
unknown

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comp(19681..20001)
DNA (321bp) protein (107aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_388_23
unknown

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20067..20432
DNA (366bp) protein (122aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_388_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20429..20812
DNA (384bp) protein (128aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20803..22386)
DNA (1584bp) protein (528aa)
ABC peptide transporter, periplasmic ligand binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW74_9PROT
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR74732.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter substrate-binding protein
SCN18_26_2_15_R5_B_scaffold_388_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22472..22849
DNA (378bp) protein (126aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_388_27
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22850..23293)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZLT7_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM87185.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_26_2_15_R5_B_scaffold_388_28
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23280..24953)
DNA (1674bp) protein (558aa)
cysI; sulfite reductase (NADPH) protein (EC:1.8.1.2)
Sulfite reductase, beta subunit (Hemoprotein) n=1 Tax=Rhizobium sp. CF122 RepID=J3BNK3_9RHIZ
Sulfite reductase, beta subunit (Hemoprotein) {ECO:0000313|EMBL:EJL54344.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCN18_26_2_15_R5_B_scaffold_388_29
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24946..25260)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4X2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS52164.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Sulfite/nitrite reductase
SCN18_26_2_15_R5_B_scaffold_388_30
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25260..26615)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F243B2
uroporphyrin-III C-methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 43 in total

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