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SCN18_26_2_15_R5_B_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_401_1
unknown

Not on your lists

comp(3..113)
DNA (111bp) protein (37aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_401_2
unknown

Not on your lists

comp(247..744)
DNA (498bp) protein (166aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_401_3
unknown

Not on your lists

1014..1235
DNA (222bp) protein (74aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_401_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1256..2086)
DNA (831bp) protein (277aa)
Transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HZ41_AZOC5
iclR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAF90532.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_26_2_15_R5_B_scaffold_401_5
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2217..3671
DNA (1455bp) protein (485aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427, ECO:0000313|EMBL:KIJ82679.1}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034C8EA1
SCN18_26_2_15_R5_B_scaffold_401_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3702..5051)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003608B80
putative outer membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5200..6165
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRF3_CYAP4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6191..6730)
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Inorganic pyrophosphatase n=2 Tax=Bradyrhizobiaceae RepID=F7QK84_9BRAD
inorganic pyrophosphatase
SCN18_26_2_15_R5_B_scaffold_401_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6822..8492)
DNA (1671bp) protein (557aa)
major facilitator transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EEF6D3
Major facilitator transporter {ECO:0000313|EMBL:KHQ97527.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
major facilitator superfamily permease
SCN18_26_2_15_R5_B_scaffold_401_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8641..9006)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K349_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE77319.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCN18_26_2_15_R5_B_scaffold_401_11
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9027..9356)
DNA (330bp) protein (110aa)
UPI0003CFC880 related cluster n=1 Tax=unknown RepID=UPI0003CFC880
Uncharacterized protein {ECO:0000313|EMBL:ESZ18201.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCN18_26_2_15_R5_B_scaffold_401_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9358..9702)
DNA (345bp) protein (115aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_13
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9756..11645)
DNA (1890bp) protein (630aa)
Na+/solute symporter (Ssf family) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIR2_TISMK
Na+/solute symporter (Ssf family)
Na+/solute symporter (Ssf family) {ECO:0000313|EMBL:AFK52650.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_26_2_15_R5_B_scaffold_401_14
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11666..11935)
DNA (270bp) protein (90aa)
Membrane protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIR3_TISMK
membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12195..12791
DNA (597bp) protein (199aa)
esterase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12882..13484
DNA (603bp) protein (201aa)
Two-component response regulator, LuxR/FixJ family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHY4_AZOL4
Two-component response regulator, LuxR/FixJ family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_17
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13502..16948)
DNA (3447bp) protein (1149aa)
Sensor histidine kinase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R3D5_9RHIZ
Sensor histidine kinase proline sensor PrlS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_18
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

Not on your lists

17065..18741
DNA (1677bp) protein (559aa)
Putative ABC transporter, ATP-binding protein with duplicated ATPase domains n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9I9_AZOL4
putative ABC transporter, ATP-binding protein with duplicated ATPase domains
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18948..19664)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J2Q857_9BURK
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
SCN18_26_2_15_R5_B_scaffold_401_20
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19781..20608)
DNA (828bp) protein (276aa)
UPI0002971993 related cluster id=1866141 bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar phosphate isomerase/epimerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_21
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20628..21449)
DNA (822bp) protein (274aa)
Serine O-acetyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWE9_PARL1
serine O-acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_22
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

Not on your lists

comp(21569..22171)
DNA (603bp) protein (201aa)
Toluene tolerance transporter, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP24_RHOCS
toluene tolerance transporter putative
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_23
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22238..23023)
DNA (786bp) protein (262aa)
VacJ family lipoprotein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JS62_9PROT
putative VacJ-like lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_24
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23270..24250
DNA (981bp) protein (327aa)
Putative transcriptional regulator (ArsR family) with SAM-dependent methyltransferase domain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9J3_AZOL4
putative transcriptional regulator (ArsR family) with SAM-dependent methyltransferase domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_25
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24247..25161
DNA (915bp) protein (305aa)
Methylenetetrahydrofolate reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP21_RHOCS
5,10-methylenetetrahydrofolate reductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_26
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25158..26228
DNA (1071bp) protein (357aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B76C51
methionine synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_27
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26228..28879
DNA (2652bp) protein (884aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F91
methionine synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_28
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28905..29630
DNA (726bp) protein (242aa)
Putative membrane protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13S12_BURXL
sulfite exporter TauE/SafE family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_401_29
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29699..30994)
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FF777F
ATPase
SCN18_26_2_15_R5_B_scaffold_401_30
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31043..31714)
DNA (672bp) protein (224aa)
transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037C3AA4
Transcriptional regulator {ECO:0000313|EMBL:KJC35824.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
two-component response regulator
Displaying items 1-30 of 35 in total

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