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SCN18_26_2_15_R5_B_scaffold_448

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_448_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122..634)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Xanthobacteraceae bacterium 501b RepID=UPI0003643234
nitrilotriacetate monooxygenase component B protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_2
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

832..1692
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIP8_AZOBR
conserved protein of unknown function; putative Adenylate cyclase domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_3
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1747..2913
DNA (1167bp) protein (389aa)
Cobalamin synthesis protein CobW, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRD9_RHOCS
cobW; cobalamin synthesis protein CobW
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2950..3699
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC15B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60909.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_26_2_15_R5_B_scaffold_448_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3676..6822)
DNA (3147bp) protein (1049aa)
Putative component of multidrug efflux pump, acrB/acrD/acrF family n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SHK2_9BRAD
putative component of multidrug efflux pump, AcrB/AcrD/AcrF family
Putative component of multidrug efflux pump, acrB/acrD/acrF family {ECO:0000313|EMBL:CCD93679.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
SCN18_26_2_15_R5_B_scaffold_448_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6840..8042)
DNA (1203bp) protein (401aa)
RND transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036263DA
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERF84217.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
secretion protein HlyD
SCN18_26_2_15_R5_B_scaffold_448_7
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8323..8868)
DNA (546bp) protein (182aa)
Predicted membrane protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FVD2_PHAMO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9364..10350
DNA (987bp) protein (329aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000369321A
Tricarboxylate transport protein TctC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_26_2_15_R5_B_scaffold_448_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10337..11242)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U154_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_10
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11337..14231
DNA (2895bp) protein (965aa)
DNA polymerase I n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MAT5_9PROT
DNA polymerase I
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_11
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14263..14880
DNA (618bp) protein (206aa)
Putative glutathione S-transferase-like protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MNZ3_PSEPS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15000..15389
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NDA2_RHOPA
Helix-hairpin-helix motif protein {ECO:0000313|EMBL:CEJ10670.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_448_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15475..15807)
DNA (333bp) protein (111aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15823..16038)
DNA (216bp) protein (72aa)
hypothetical protein id=14430353 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
outer membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16065..16982)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46SE9_CUPPJ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16979..18151)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J2RGP9_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_17
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18258..20048)
DNA (1791bp) protein (597aa)
putative adenylate/guanylate cyclase (EC:4.6.1.1)
Putative adenylate/guanylate cyclase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIV6_RHIFH
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20198..21805)
DNA (1608bp) protein (536aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H4C5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_19
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22075..22794)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCB6_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_20
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22925..23620
DNA (696bp) protein (232aa)
Response regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YFG5_9PROT
chvI; two-component transcriptional regulatory protein ChvI
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_21
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23589..25427
DNA (1839bp) protein (613aa)
Signal transduction histidine kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0C4_9PROT
Signal transduction histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_22
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25424..25870
DNA (447bp) protein (149aa)
Serine kinase of the HPr protein, regulates carb ohydrate metabolism n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5S0_9PROT
Putative HPr kinase/phosphorylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_23
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25867..26823
DNA (957bp) protein (319aa)
UPF0042 nucleotide-binding protein K678_12374 n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TRJ8_PHAFV
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_24
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26840..27244
DNA (405bp) protein (135aa)
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TFX7_PHAFV
PTS system fructose, IIA component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_25
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27241..27549
DNA (309bp) protein (103aa)
HPr kinase n=1 Tax=Afipia birgiae RepID=UPI000313E0E4
phosphotransferase system, HPr-related protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_26
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27752..29143
DNA (1392bp) protein (464aa)
Adenosylhomocysteinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ILJ5_AZOC5
S-adenosyl-L-homocysteine hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_27
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29201..29644
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035FFFD1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_28
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29604..30635
DNA (1032bp) protein (344aa)
Aminoglycoside phosphotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6E7_9PROT
Aminoglycoside phosphotransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_29
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30647..31324
DNA (678bp) protein (226aa)
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SBQ0_PHAFV
nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_448_30
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31321..32700
DNA (1380bp) protein (460aa)
Inactivated superfamily I helicase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAA0_MAGSA
putative helicase (addB)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Displaying 30 items

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