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SCN18_26_2_15_R5_B_scaffold_511

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_511_trna_1
unknown

Not on your lists

comp(28..114)
DNA (87bp)
transferRNA Ser
SCN18_26_2_15_R5_B_scaffold_511_1
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179..1423
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036BFDE5
aminotransferase class V
Aminotransferase class-V family protein 4 {ECO:0000313|EMBL:ADP18815.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCN18_26_2_15_R5_B_scaffold_511_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1635..1934
DNA (300bp) protein (100aa)
50S ribosomal protein L21 n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9Q6_PHAFV
rplU; 50S ribosomal protein L21
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1960..2232
DNA (273bp) protein (91aa)
50S ribosomal protein L27 (EC:3.6.3.17)
50S ribosomal protein L27 n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BMQ5_PUNMI
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_4
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2312..3331
DNA (1020bp) protein (340aa)
GTPase Obg n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=OBG_RHOCS
GTP-binding protein GTP1
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_26_2_15_R5_B_scaffold_511_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3328..4455
DNA (1128bp) protein (376aa)
Glutamate 5-kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9G2_AZOL4
proB; glutamate 5-kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_6
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4485..5765
DNA (1281bp) protein (427aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITK8_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5819..6910
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003797EBB
iojap family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_8
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6935..7393
DNA (459bp) protein (153aa)
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIT5_AZOBR
50S rRNA methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7489..8079
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000348C576
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_10
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8079..9680
DNA (1602bp) protein (534aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IEI9_9PROT
phosphoglyceromutase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_11
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9837..11270
DNA (1434bp) protein (478aa)
Carboxy-terminal-processing peptidase S41A n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIT0_AZOBR
peptidase S41
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11456..12499
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036933D8
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_13
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12496..12993
DNA (498bp) protein (166aa)
RNA pyrophosphohydrolase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIS8_AZOBR
RNA pyrophosphohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13221..14039)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375BAAA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_15
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14164..14577)
DNA (414bp) protein (138aa)
H+-transporting two-sector ATPase subunit delta/epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FT48_PHAMO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_16
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14582..16006)
DNA (1425bp) protein (475aa)
ATP synthase subunit beta n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIS5_AZOBR
ATP synthase F0F1 subunit beta
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16043..16930)
DNA (888bp) protein (296aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=ATPG_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_18
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16946..18472)
DNA (1527bp) protein (509aa)
ATP synthase subunit alpha n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5R2_AZOL4
atpA1; ATP synthase, F1 sector subunit alpha
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_19
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18473..19036)
DNA (564bp) protein (188aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=ATPD_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_20
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19225..21423)
DNA (2199bp) protein (733aa)
Helicase PriA n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H2R0_9PROT
priA; primosomal protein N' (replication factor Y)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21512..22168
DNA (657bp) protein (219aa)
transaldolase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B56C27
tal; transaldolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_22
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22186..22941
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIR7_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_23
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22964..23902
DNA (939bp) protein (313aa)
Tyrosine recombinase XerC n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIN5_9PROT
xerC; site-specific tyrosine recombinase XerC
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_24
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23907..24599
DNA (693bp) protein (231aa)
Aspartate racemase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122A8_POLSJ
aspartate racemase
Aspartate racemase {ECO:0000313|EMBL:KJK24830.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCN18_26_2_15_R5_B_scaffold_511_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24603..25019)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035FE264
acetyltransferase, GNAT family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_26
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

comp(25029..26294)
DNA (1266bp) protein (422aa)
Amino acid permease-associated region n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQ19_AKKM8
amino acid permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26432..26959)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000376DAA9
Dihydrofolate reductase {ECO:0000313|EMBL:EDP65961.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Dihydrofolate reductase
SCN18_26_2_15_R5_B_scaffold_511_28
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26976..27851)
DNA (876bp) protein (292aa)
Dienelactone hydrolase id=4969018 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
prolyl oligopeptidase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_511_29
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27848..28036)
DNA (189bp) protein (63aa)
Rrf2 family protein transcriptional regulator family protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJL8_9SPHN
Rrf2 family transcriptional regulator
Rrf2 family protein transcriptional regulator family protein {ECO:0000313|EMBL:EHJ58487.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
Displaying 30 items

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