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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 1-50 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_11528
Class: Alphaproteobacteria (66.67%)
3 1583 bp 61.02 20.18 46.43
SCN18_26_2_15_R5_B_scaffold_3574
Class: Alphaproteobacteria (50%)
6 4414 bp 57.05 31.09 58.65
SCN18_26_2_15_R5_B_scaffold_5998
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (66.67%)
3 2875 bp 64.28 20.71 67.83
SCN18_26_2_15_R5_B_scaffold_4873
Class: Alphaproteobacteria (66.67%)
3 3412 bp 60.79 16.57 68.14
SCN18_26_2_15_R5_B_scaffold_1290
Class: Alphaproteobacteria (72.73%)
11 10731 bp 62.01 24.48 69.50
SCN18_26_2_15_R5_B_scaffold_3639
Class: Alphaproteobacteria (50%)
6 4353 bp 60.37 27.98 70.99
SCN18_26_2_15_R5_B_scaffold_5061
Class: Alphaproteobacteria (75%)
4 4435 bp 66.74 22.36 73.66
SCN18_26_2_15_R5_B_scaffold_2209
Class: Alphaproteobacteria (50%)
8 6645 bp 63.01 28.42 75.12
SCN18_26_2_15_R5_B_scaffold_1518
Phylum: Proteobacteria (69.23%)
13 16490 bp 62.72 29.07 75.14
SCN18_26_2_15_R5_B_scaffold_652
Class: Alphaproteobacteria (50%)
22 21570 bp 62.20 17.45 75.42
SCN18_26_2_15_R5_B_scaffold_7345
Species: R_Alphaproteobacteria_66_14 (50%)
4 2375 bp 63.16 25.45 78.06
SCN18_26_2_15_R5_B_scaffold_5777
Phylum: Proteobacteria (50%)
4 2963 bp 64.97 15.69 78.27
SCN18_26_2_15_R5_B_scaffold_6172
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
2 2798 bp 62.22 26.64 78.27
SCN18_26_2_15_R5_B_scaffold_5963
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
5 2888 bp 64.37 20.05 78.64
SCN18_26_2_15_R5_B_scaffold_2041
Phylum: Proteobacteria (66.67%)
9 7132 bp 64.78 26.61 78.91
SCN18_26_2_15_R5_B_scaffold_5768
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (66.67%)
3 2967 bp 66.57 26.74 78.97
SCN18_26_2_15_R5_B_scaffold_1223
Class: Alphaproteobacteria (53.85%)
13 11308 bp 63.99 22.03 79.43
SCN18_26_2_15_R5_B_scaffold_8307
Order: Rhizobiales (66.67%)
3 2115 bp 66.05 22.98 80.14
SCN18_26_2_15_R5_B_scaffold_11597
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
2 1573 bp 67.96 19.07 80.29
SCN18_26_2_15_R5_B_scaffold_8343
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (66.67%)
3 2107 bp 60.61 27.84 80.45
SCN18_26_2_15_R5_B_scaffold_5851
Class: Alphaproteobacteria (80%)
5 2933 bp 66.42 19.38 81.11
SCN18_26_2_15_R5_B_scaffold_1872
Phylum: Proteobacteria (66.67%)
9 7663 bp 65.98 24.68 81.43
SCN18_26_2_15_R5_B_scaffold_2309
Class: Alphaproteobacteria (66.67%)
9 6380 bp 63.87 25.70 81.54
SCN18_26_2_15_R5_B_scaffold_4548
Class: Alphaproteobacteria (50%)
4 3591 bp 63.74 11.61 81.70
SCN18_26_2_15_R5_B_scaffold_948
Order: Rhizobiales (57.14%)
14 14555 bp 64.06 21.59 81.91
SCN18_26_2_15_R5_B_scaffold_2383
Class: Alphaproteobacteria (55.56%)
9 6196 bp 66.03 14.21 81.92
SCN18_26_2_15_R5_B_scaffold_4309
Order: Rhizobiales (50%)
4 3741 bp 66.03 23.86 82.12
SCN18_26_2_15_R5_B_scaffold_1441
Class: Alphaproteobacteria (60%)
10 9577 bp 66.47 24.39 82.29
SCN18_26_2_15_R5_B_scaffold_5904
Class: Alphaproteobacteria (50%)
4 2910 bp 64.23 21.70 82.37
SCN18_26_2_15_R5_B_scaffold_8970
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (66.67%)
3 1981 bp 62.34 24.38 82.84
SCN18_26_2_15_R5_B_scaffold_8791
Class: Alphaproteobacteria (66.67%)
3 2017 bp 64.80 27.07 82.85
SCN18_26_2_15_R5_B_scaffold_4314
Class: Alphaproteobacteria (80%)
5 3737 bp 68.69 21.96 82.85
SCN18_26_2_15_R5_B_scaffold_2921
Class: Alphaproteobacteria (80%)
5 5211 bp 61.47 25.01 83.42
SCN18_26_2_15_R5_B_scaffold_473
Class: Alphaproteobacteria (60.61%)
33 30830 bp 63.03 28.47 83.50
SCN18_26_2_15_R5_B_scaffold_9443
Species: R_Alphaproteobacteria_66_14 (66.67%)
3 1892 bp 66.97 22.60 83.56
SCN18_26_2_15_R5_B_scaffold_1764
Class: Alphaproteobacteria (56.25%)
16 7991 bp 66.59 27.46 83.57
SCN18_26_2_15_R5_B_scaffold_6652
Class: Alphaproteobacteria (100%)
3 2606 bp 64.39 23.89 83.69
SCN18_26_2_15_R5_B_scaffold_1173
Class: Alphaproteobacteria (62.5%)
16 14761 bp 64.52 28.22 84.47
SCN18_26_2_15_R5_B_scaffold_5701
Order: Rhizobiales (66.67%)
3 3003 bp 65.00 29.12 84.52
SCN18_26_2_15_R5_B_scaffold_2043
Class: Alphaproteobacteria (50%)
6 7128 bp 64.63 26.89 84.60
SCN18_26_2_15_R5_B_scaffold_2462
Class: Alphaproteobacteria (50%)
8 5998 bp 65.61 26.58 84.63
SCN18_26_2_15_R5_B_scaffold_5384
Phylum: Proteobacteria (60%)
5 3157 bp 64.52 25.94 84.76
SCN18_26_2_15_R5_B_scaffold_1985
Class: Alphaproteobacteria (50%)
6 7256 bp 67.53 27.23 85.01
SCN18_26_2_15_R5_B_scaffold_2039
Phylum: Proteobacteria (66.67%)
6 7135 bp 64.85 24.22 85.86
SCN18_26_2_15_R5_B_scaffold_162
Class: Alphaproteobacteria (63.04%)
92 94859 bp 63.35 24.88 85.92
SCN18_26_2_15_R5_B_scaffold_3458
Class: Alphaproteobacteria (60%)
5 4524 bp 65.05 27.62 85.94
SCN18_26_2_15_R5_B_scaffold_334
Class: Alphaproteobacteria (58.14%)
43 44840 bp 63.82 28.87 86.23
SCN18_26_2_15_R5_B_scaffold_2249
Order: Rhizobiales (57.14%)
7 6525 bp 65.10 23.93 86.30
SCN18_26_2_15_R5_B_scaffold_1105
Phylum: Proteobacteria (61.9%)
21 16078 bp 66.28 19.83 86.34
SCN18_26_2_15_R5_B_scaffold_5774
Class: Alphaproteobacteria (50%)
4 2964 bp 64.61 27.63 86.34
Displaying items 1-50 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.