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SCN18_25_1_16_R2_B_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_231_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15..1007)
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IB29_9BRAD
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ERF80775.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_231_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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1104..2012
DNA (909bp) protein (303aa)
Phenazine biosynthesis PhzC/PhzF protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211N6_RHOPB
Phenazine biosynthesis protein {ECO:0000313|EMBL:KIZ38931.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
phenazine biosynthesis PhzC/PhzF protein
SCN18_25_1_16_R2_B_scaffold_231_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2082..2522)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211N4_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88902.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_25_1_16_R2_B_scaffold_231_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2672..4960)
DNA (2289bp) protein (763aa)
Adenylate/guanylate cyclase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLD3_NITHX
Adenylate/guanylate cyclase {ECO:0000313|EMBL:ABE62964.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
adenylate/guanylate cyclase
SCN18_25_1_16_R2_B_scaffold_231_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5238..5654
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M96_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ06938.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_25_1_16_R2_B_scaffold_231_6
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage

Not on your lists

comp(5686..7029)
DNA (1344bp) protein (448aa)
Tetratricopeptide TPR_2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLD2_NITHX
tetratricopeptide TPR_2
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABE62965.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_231_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7277..11662)
DNA (4386bp) protein (1462aa)
Putative outer membrane autotransporter barrel n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G588_9BRAD
hypothetical protein
Putative outer membrane autotransporter barrel {ECO:0000313|EMBL:BAL75925.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R2_B_scaffold_231_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11900..12790)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZQ5_9PROT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGY01256.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
putative transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_231_trna_1
unknown

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comp(12941..13014)
DNA (74bp)
transferRNA Arg
SCN18_25_1_16_R2_B_scaffold_231_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13203..13553
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SRT7_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05004.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_25_1_16_R2_B_scaffold_231_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13560..16208)
DNA (2649bp) protein (883aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLC7_NITHX
multi-sensor signal transduction histidine kinase
SCN18_25_1_16_R2_B_scaffold_231_11
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16424..18598)
DNA (2175bp) protein (725aa)
Quino(Hemo)protein alcohol dehydrogenase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QPR7_9BRAD
Quino(Hemo)protein alcohol dehydrogenase {ECO:0000313|EMBL:EGP06694.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Pyrrolo-quinoline quinone
SCN18_25_1_16_R2_B_scaffold_231_12
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18886..20451
DNA (1566bp) protein (522aa)
fatty-acid--CoA ligase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000349B4E8
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEJ11749.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
AMP-dependent synthetase and ligase
SCN18_25_1_16_R2_B_scaffold_231_13
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20472..21392)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000368A33F
Putative monooxygenase {ECO:0000313|EMBL:KFC66528.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hydrolase
SCN18_25_1_16_R2_B_scaffold_231_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21556..22350)
DNA (795bp) protein (265aa)
NUDIX hydrolase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KS8_RHOP5
NUDIX hydrolase {ECO:0000313|EMBL:KIZ43342.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NUDIX hydrolase
SCN18_25_1_16_R2_B_scaffold_231_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22355..23311)
DNA (957bp) protein (319aa)
Bll5331 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89JF2_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ70890.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_231_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23435..24313)
DNA (879bp) protein (293aa)
short-chain dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000362621F
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50654.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase
SCN18_25_1_16_R2_B_scaffold_231_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24462..25322)
DNA (861bp) protein (287aa)
MaoC-like dehydratase:Asparaginase/glutaminase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N4Z1_RHOPA
MaoC-like dehydratase
MaoC-like dehydratase:Asparaginase/glutaminase {ECO:0000313|EMBL:CAE28633.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCN18_25_1_16_R2_B_scaffold_231_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25384..25773)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELG5_BRASB
DNA-binding protein {ECO:0000313|EMBL:KJC49327.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_231_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25773..26921)
DNA (1149bp) protein (383aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Putative thiolase/acetyl-CoA acetyltransferase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S253_9BRAD
Putative thiolase/acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CCD88280.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
SCN18_25_1_16_R2_B_scaffold_231_20
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27024..30515)
DNA (3492bp) protein (1164aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Pyruvate ferredoxin/flavodoxin oxidoreductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLC6_NITHX
Pyruvate ferredoxin/flavodoxin oxidoreductase {ECO:0000313|EMBL:ABE62971.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_231_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30826..32040
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037C2912
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50649.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
alcohol dehydrogenase
SCN18_25_1_16_R2_B_scaffold_231_22
unknown

Not on your lists

32167..32403
DNA (237bp) protein (79aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_231_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32545..32961
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D558_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL09717.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_25_1_16_R2_B_scaffold_231_24
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33053..33868)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLC4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62973.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_231_25
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33997..34344)
DNA (348bp) protein (116aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FA79BC
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50645.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_231_26
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34371..34679)
DNA (309bp) protein (103aa)
NIPSNAP family containing protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000361D3A1
Peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:ERF80809.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_231_27
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34788..35471
DNA (684bp) protein (228aa)
Putative transcriptional regulatory protein, Ars family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTY1_9BRAD
Putative transcriptional regulatory protein, Ars family {ECO:0000313|EMBL:CCE09919.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
ArsR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_231_28
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35667..35930
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYR4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34875.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_231_29
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35992..36624)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJA9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38458.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 1-30 of 75 in total

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