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SCN18_25_1_16_R2_B_scaffold_105_85

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(86247..86729)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 160.0
  • Bit_score: 288
  • Evalue 3.10e-75
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RLMH_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 160.0
  • Bit_score: 288
  • Evalue 2.20e-75
rRNA large subunit methyltransferase similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 160.0
  • Bit_score: 288
  • Evalue 6.20e-76

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCGTCTCGTCGTCATTGCCATCGGCCGTCTCAAACAAGGTCCGGAGCGGGAGCTTGCCGACCGCTATCGCGGACGCTTCGACGATATCGGTCGCAAGCTCGGCTTCCGCGGCCTCGACATCCATGAAATCCCCGAAAGCCGTGCGCGCGAAACCGAGCGCCGGATCAGCGACGAGGCCGCGGCGATCCTCGCCCTGGTTCCGGAAGGGTCGGCCCTGGTGGCGCTGGACGAGACGGGCAAAAACATCGACAGCGCCACATTCGCAGGCCATCTTGGCCGCTGGCGGGATGAGTCGGTGGCCAGCACTATTTTCGTCATTGGCGGCGCGGACGGACTTTCGCCTGAATTGCGGCGCAAGGCTAAGCTCAGCGTCGCATTCGGCGCGGCAACCTGGCCGCACCAGATTGTACGCGTGATGTTGCTGGAACAGATCTACCGGGCCGCGACCATCCTGGCCGGCCACCCCTATCACCGCGGCTAG
PROTEIN sequence
Length: 161
MRLVVIAIGRLKQGPERELADRYRGRFDDIGRKLGFRGLDIHEIPESRARETERRISDEAAAILALVPEGSALVALDETGKNIDSATFAGHLGRWRDESVASTIFVIGGADGLSPELRRKAKLSVAFGAATWPHQIVRVMLLEQIYRAATILAGHPYHRG*