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SCN18_25_1_16_R2_B_scaffold_105_86

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(86777..87250)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQT5_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 119.0
  • Bit_score: 212
  • Evalue 2.00e-52
Iojap-related protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 119.0
  • Bit_score: 212
  • Evalue 5.50e-53
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 119.0
  • Bit_score: 212
  • Evalue 2.70e-52

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGCCAAAGGATTCGGCGTCCGCGATACAGCGAAAGGAATGGTCCCTGACCACATCTGTATTGTCCAAGTCCAGGAAGCCCGTCGCATCGAAAACGCGTAAGACGGCCTCCGCGGTTTCACCGGCGCCATCTGCCGCCGACGAAACCCTCAACCTGATCCTCTCCCGCCTCGAAGACATGAAGGCGGAAGAGACGGTCACCATCGACCTTCGCGGCAAATCGGCATTTTCGGACTACATGGTCGTCACCACGGGCCGGTCGAACCGGCATGTCGGTGCGGTCGCCGAGAACGTCGCCAAGGGTCTCAAGGAAACCGGAGTCAAAGGCATCCACATCGAGGGCTTGCCCAACTGCGATTGGGTGCTGATCGATTCCGGCGACGTGATCGTACACGTGTTCAGGCCGGAGGTTCGCGAGTTCTACAACCTCGAACGGTTGTGGACGCAGAACACGGCGACGGCGAAGACGGTCTGA
PROTEIN sequence
Length: 158
MPKDSASAIQRKEWSLTTSVLSKSRKPVASKTRKTASAVSPAPSAADETLNLILSRLEDMKAEETVTIDLRGKSAFSDYMVVTTGRSNRHVGAVAENVAKGLKETGVKGIHIEGLPNCDWVLIDSGDVIVHVFRPEVREFYNLERLWTQNTATAKTV*