ggKbase home page
Advanced Search
Search Help

SCN18_25_1_16_R2_B_scaffold_454_12

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 12011..16210

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 1399.0
  • Bit_score: 2613
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 1399.0
  • Bit_score: 2613
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RPOC_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 1399.0
  • Bit_score: 2613
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4200
ATGAACCAAGAAGTGATGAATCTCTTCAATCCGACGACCCCGGCCCAGGTCTTCGACCAGATCCGGATTTCGATCGCGTCGCCGGAAAAGATTCTGTCGTGGTCCTACGGCGAAATCAAAAAGCCGGAGACGATCAACTACCGCACCTTCAAGCCGGAGCGTGACGGCCTGTTCTGCGCGCGCATCTTCGGGCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGGATGAAGTACAAGGGCATCATCTGCGAGAAGTGCTCGGTCGAGGTCACGCTGTCGCGCGTTCGTCGCGAGCGCATGGGCCACATCGAGCTCGCAGCGCCCGTCGCGCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGCATCGGCCTTCTGCTCGACATGACGCTGAAGGATCTCGAGCGCATCCTCTATTTCGAATACTACGTCGTTCTCGAGCCGGGTCTCACCGCGCTCAAGGACCGTCAGCTGCTGTCGGAAGAGGAATACCTCAAGGCGCAGGACGAGTACGGCCAGGACAGCTTCACCGCCATGATCGGCGCCGAGGCGATCCGCGAACTGCTGAAGGGCCTCGAGCTCGAGAAGCTGGAAGTCGAACTCCGTGCCGAGATGCAGGAGACCGACTCCGACATCAAGCACAAGAAGCTCGCCAAGCGTCTGAAGATCGTCGAGGCGTTCCGCGTCTCCGGCAACAAGCCGGAATGGATGATCCTCACCGTCGTTCCCGTGATTCCGCCGGACCTGCGTCCGCTGGTGCCGCTCGACGGCGGCCGCTTCGCGACCTCGGACCTCAACGACCTCTATCGCCGCGTCATCAACCGCAACAATCGTTTGAAGCGGCTGATGGAGCTTCGTGCGCCCGACATCATCATCCGCAACGAGAAGCGCATGCTTCAGGAAGCGGTCGATGCGTTGTTCGACAACGGCCGCCGCGGCCGCGTCATCACCGGCGCCAACAAGCGTCCGCTGAAGTCGCTCGCCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTATTCGGGCCGGTCGGTGATCGTGGTCGGTCCCGAGCTCAAGCTGCATCAGTGCGGCCTGCCGAAGAAGATGGCGCTCGAACTGTTCAAGCCGTTCATCTATTCGCGGCTCGACGCCAAGGGTCTGTCCACCACCGTGAAGCAGGCGAAGAAGCTCGTCGAGAAGGAGCGTCCCGAGGTCTGGGATATTCTGGACGAGGTCATTCGCGAGCATCCCGTGCTGCTGAACCGCGCCCCGACGCTGCATCGTCTCGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAAGGTAAGGCGATCCAGCTTCACCCGCTGGTGTGCTCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTTCCGCTGTCGCTGGAAGCGCAGCTCGAAGCGCGCGTGCTCATGATGTCGACCAACAACATCCTGCATCCCGCGAACGGCCAGCCGATCATCGTGCCGTCGCAGGACATGGTGCTTGGTCTGTACTTCATGACGCTGTTGCGCGAAGGCCTGCCCGGCGAGGGCAAGGTGTTCGGCGACATGGCGGACCTCGAGCATGCGTTGCAGTCGAAGGTCATCAGCCTGCACACCAAGATCCGGTATCGCTGGGAAGGTATCAACGACAAGGGCGAGACGTTCCGCGCGCTGTACGACACAACGCCGGGCCGCGTCATGCTCGCTCAGGTGCTGCCGCGCAGCCCGAGGATGACATTCGACGTCGTCAACAAGCTGATGACCAAGCGCGAAATCTCCGGGATGATCGACACGGTTTATCGTCACTGCGGTCAGAAGGAGACGGTGATCTTCTGCGACCGGATCATGGCGCTCGGTTTCTACAATGCGTTCAAGGCCGGCATTTCGTTCGGCAAGGACGACATGGTGGTGCCGCACTCGAAGTGGAAGATCGTCGATGCGACCCGCGCGCTCGCCAAGGATTTCGAGCAGCAGTACAATGACGGTCTGATCACCCACGGTGAGAAGTACAATAAGGTGATCGACGCCTGGTCGAAGGCGGGCGAAGAGGTCGCCAAGGAGATGATGAAGGAAATCTCCGCGACCAAGAAGACCGCCAAGGGCCAGGAGGCCCAGATCAACTCGATCTACATGATGGCTCACTCGGGTGCGCGCGGTTCGCCGGCCCAGATGCGTCAGCTTGCCGGTATGCGCGGCCTGATGGCCAAGCCGTCGGGCGAGATCATCGAGACGCCGATCATCTCCAACTTCAAGGAAGGTCTGTCGGTTCTCGAATACTTCAACTCGACCCACGGCGCCCGCAAGGGTCTCGCGGATACCGCGTTGAAGACCGCGAACTCGGGTTATTTGACCCGTCGTCTGGTGGACGTAGCGCAGGACTGCATCATCAATGCGGACGATTGCGGCACCAAGCTCGGCATCAAGATGCGTGCGATCATCGACGCCGGCACGGTCGTGGCGTCGCTGGGATCGCGCATCCTGGGCCGCACGGCGTGCGAGGATATCCGCGATCCCGCCACCAACAAGGTGCTGATCAAGCGCAACACCTTGATGGAGGAAAGCCACGTCGATCAGATCGCGCAGGCCAACATCCAGGAGGTCAAGATCCGCTCGGCGCTGACCTGCGAACTGGTCAACGGCATCTGCGCCAAGTGCTACGGGCGCGATCTCGCGCGCGGTACACCGGTCAACCACGGTGAGGCCGTCGGCGTCATCGCAGCGCAGTCGATCGGCGAGCCAGGCACGCAGTTGACGATGCGTACGTTCCACATCGGCGGCGCGGCGCAGCTCAACGAACAGTCGGTCATCGAGTCGAACTTCGACGGCAAGATCGCCATCAAGAACCGGGCCATCGCCAAGAACAGCGAAGGCCATCTGGTCGCGATGGTGCGCAATATGGTCATTGCGATCGTTGATGCGGACGGCACCGAGCGTGCGACCCATCGCATCCAGTACGGCGCGCGGGTGCACGTCGACGAGGGCGATATGGTCAAGCGCGGCCAGCGCATCGCGGAGTGGGATCCGTACACCCGGCCGATCCTTACCGAGGTCGAAGGCACCATCGCCTTCGAGGACCTCGTGGAAGGTCAGTCGATTTCGGAAACGCTCGACGAGTCCACCGGTATCGCCAAGCGTATCGTCATCGACTGGCGTTCGACCCGTGGCGGTGCCGACCTGCGTCCCGCGATCGTCATCAAGGGCAAGGACGGCAAGGTGCTGAAGCTCGCACGTGGCGGCGATGCCCGTTACATGCTGTCGGTCGACGCGATTCTGTCGGTCGACGTCGGCGCTAAGGTGAAGCCGGGCGACATCCTTGCGCGTATCTCGACCGAGAGCGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGCGTCGCCGAATTGTTCGAGGCCCGCAAGCCGAAGGATGCGGCGATCATCGCCGAAATCGCCGGCACCATCCGGTTCGGCCGCGACTACAAGAACAAGCGTCGCATCTCGATCGAGCCGGTCGACAAGAACGAGGAGACCCGCGAGTACCTCATTCCGAAGGGCAAGCACATCCATCTGCAGGATGGCGACATCGTCGAGAAGGGTGACTTCATCGTCGAGGGCAATCCGGCACCGCACGACATTCTGGCGATCAAGGGCATCGAGGAGCTCGCTGCCTATCTGGTCAACGAAATCCAGGAGGTCTACCGGCTGCAGGGCGTGCTCATCAACGACAAGCACATCGAGGTGATTGTCCGTCAGATGCTGCAGAAGGTGGAGATCACCGACCAGGGCGAGACCGACATGATCTCGGGCGAGCAGATCGACAAGATCGAGTTCGACCAGATCAACGCCAAGGCGAAGGAAGAGGGCAAGAAGCCCGCGACCGGAACTCCGGTGCTGCTCGGCATCACCAAGGCGAGCCTGCAGACCCGCTCGTTCTTCTCGGCGGCGTCGTTCCAGGAGACCACGCGTGTGCTCACCGAAGCCGCAGTCAACGGCAAGGTGGACCCGCTCGAAGGCCTCAAGGAGAACGTCATCGTCGGCCGCCTGATCCCGGCGGGAACCGGCGCTTCGATGGCCAAGATCCGCGAAGTCGCAATGAAGCGCGACAAGCTGATTCTGGACGAGCGCGAGAAGCAGGCGGCAATTACCCCTGCGGCACCGGAAGCGGAACCGCTGGCATTGCCGCCGGCTGAGTAA
PROTEIN sequence
Length: 1400
MNQEVMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEEEYLKAQDEYGQDSFTAMIGAEAIRELLKGLELEKLEVELRAEMQETDSDIKHKKLAKRLKIVEAFRVSGNKPEWMILTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGQPIIVPSQDMVLGLYFMTLLREGLPGEGKVFGDMADLEHALQSKVISLHTKIRYRWEGINDKGETFRALYDTTPGRVMLAQVLPRSPRMTFDVVNKLMTKREISGMIDTVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHSKWKIVDATRALAKDFEQQYNDGLITHGEKYNKVIDAWSKAGEEVAKEMMKEISATKKTAKGQEAQINSIYMMAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIINADDCGTKLGIKMRAIIDAGTVVASLGSRILGRTACEDIRDPATNKVLIKRNTLMEESHVDQIAQANIQEVKIRSALTCELVNGICAKCYGRDLARGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSVIESNFDGKIAIKNRAIAKNSEGHLVAMVRNMVIAIVDADGTERATHRIQYGARVHVDEGDMVKRGQRIAEWDPYTRPILTEVEGTIAFEDLVEGQSISETLDESTGIAKRIVIDWRSTRGGADLRPAIVIKGKDGKVLKLARGGDARYMLSVDAILSVDVGAKVKPGDILARISTESAKTRDITGGLPRVAELFEARKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKNEETREYLIPKGKHIHLQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQIDKIEFDQINAKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAMKRDKLILDEREKQAAITPAAPEAEPLALPPAE*