ggKbase home page

SCN18_25_1_16_R2_B_scaffold_454_13

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 16375..17451

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036EFBA0 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 359.0
  • Bit_score: 345
  • Evalue 4.40e-92
DNA-binding HTH domain-containing protein {ECO:0000313|EMBL:EJZ29958.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 356.0
  • Bit_score: 409
  • Evalue 3.50e-111
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 371.0
  • Bit_score: 289
  • Evalue 8.10e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_65_23 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGCCGAAGATCTGATTGAAAGCATCTACGAAGCAGCTGCCGTACCGACGCTGTGGCCCGATGTTCTCAACAGGGTCTCGGAACGCGTTGGGGGAAGCGGTGGCGTTCTGGTGGCTGCCCGGAATGGTTATGACCGCCTGATCAGTTCGCCCAACCTCGCTCATGCAGTCCACGACTTCATGAACAACGGCTGGGCGGCACGCGATCCCAGGCTTCCGCGCGCGCTGGCGCTCAATCATCCCGGCTTCATCAACGACGGCGATCTTCTCACCGACGAAGAGATCGCGACGAATGACGTCTACGCCAACTTCTTTCGTCCGCACGGCATCGGCTACATGGCCGCGACCATGATTCACAGTCCGAGTGGAGATTTCATCGGCGTCGTCCTTGAGCGACATCAGGATGACGGTCCGGTCCCGCGCGACACCGTTGCCTTTCTCGATACCCTGCGGCCACATCTTGCGCGCGCGTCCTTGCTCGCGTTTCGCATCGGTTTTGAGCAGGCTCGGGCGCAAGCAGAGGCGCTGCAGGCGATGGGGTTGCCGGCCGCCGTGCTGCGGCACGGTGGAAGCGTTCTCGCTGCGAACGCACTGTTTCAGGCACTCATTCCAACCGTTGCGCAGGATCGCCGACATCGGGTGGTGTTGATGAACGACAGCGCCGATGCACTGCTGGCGACGGCGCTCGCACAATGCCGTGCCGGTGGCCTGATGACAGGCCCGACCTCGATTCCACTTCCTGCTGAAGACGATCAACCGCCGATGATCGTCCATCTCGTGCCGGTTCGCGGTGCGGCGCACGATGTTTTCAGCCAGTCGGCCATGCTGCTTCTGGTCACGCCGGTCGACCGGGCGGCGGTGCCGACGGCTGAGGTATTGCAGGGGCTGTTCGATCTGACACCGGCGGAGGCGCGCATCGCGAGGGGAATCGGTCTTGCCCAGTCCGTGGAGGCGCTGGCCGCATCGCAAGGCGTATCGCGCGAGACCGTCCGCAGCCATTTGAAACAGGTGCTGGCAAAAACGGGCCTCAGCCGCCAGGCCGAATTGGTGAGCCTGCTGGCAGGCCGCACGATCTAA
PROTEIN sequence
Length: 359
MAEDLIESIYEAAAVPTLWPDVLNRVSERVGGSGGVLVAARNGYDRLISSPNLAHAVHDFMNNGWAARDPRLPRALALNHPGFINDGDLLTDEEIATNDVYANFFRPHGIGYMAATMIHSPSGDFIGVVLERHQDDGPVPRDTVAFLDTLRPHLARASLLAFRIGFEQARAQAEALQAMGLPAAVLRHGGSVLAANALFQALIPTVAQDRRHRVVLMNDSADALLATALAQCRAGGLMTGPTSIPLPAEDDQPPMIVHLVPVRGAAHDVFSQSAMLLLVTPVDRAAVPTAEVLQGLFDLTPAEARIARGIGLAQSVEALAASQGVSRETVRSHLKQVLAKTGLSRQAELVSLLAGRTI*