ggKbase home page

scn_reactorb_scaffold_43168

Search features with annotation key words

Displaying items 61-90 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_43168_61
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


75725..75907
DNA (183bp) protein (61aa)
UPI0003A0FEA2 related cluster n=1 Tax=unknown RepID=UPI0003A0FEA2
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
rpmF; 50S ribosomal protein L32
scn_reactorb_scaffold_43168_62
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76001..77053
DNA (1053bp) protein (351aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phosphate acyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I835_9BURK
phosphate acyltransferase
scn_reactorb_scaffold_43168_63
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77050..78030
DNA (981bp) protein (327aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Delftia acidovorans RepID=S2WIS3_DELAC
scn_reactorb_scaffold_43168_64
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78092..79045
DNA (954bp) protein (318aa)
[acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAX7_ACISJ
scn_reactorb_scaffold_43168_65
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79042..79782
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BV46_9BURK
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EHL23802.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
3-oxoacyl-(acyl-carrier-protein) reductase
scn_reactorb_scaffold_43168_66
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79887..80126
DNA (240bp) protein (80aa)
Acyl carrier protein n=18 Tax=Comamonadaceae RepID=ACP_ACIAC
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scn_reactorb_scaffold_43168_67
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80172..81416
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I838_9BURK
3-oxoacyl-ACP synthase
Tax=GWA2_Burkholderiales_64_37_curated
scn_reactorb_scaffold_43168_68
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81453..81920
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDQ4_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34063.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_43168_69
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81936..82568
DNA (633bp) protein (211aa)
UPI0003D3DBCF related cluster n=1 Tax=unknown RepID=UPI0003D3DBCF
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
RNA polymerase sigma factor rpoe
scn_reactorb_scaffold_43168_70
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82592..83236
DNA (645bp) protein (215aa)
anti sigma-E protein RseA id=12552448 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
anti sigma-E protein RseA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_43168_71

Not on your lists

83328..84788
DNA (1461bp) protein (487aa)
protease Do (EC:3.4.21.108)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DMC3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98426.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scn_reactorb_scaffold_43168_72
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84805..86208
DNA (1404bp) protein (468aa)
Osmosensitive K+ channel histidine kinase KdpD (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036AC75F
scn_reactorb_scaffold_43168_73
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86205..86906
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037A30BD
two component transcriptional regulator, winged helix family
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG17712.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
scn_reactorb_scaffold_43168_74
unknown

Not on your lists

87063..88718
DNA (1656bp) protein (552aa)

This feature has no annotations

scn_reactorb_scaffold_43168_75
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88737..90050
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQ60_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU43737.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
scn_reactorb_scaffold_43168_76
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90259..92193
DNA (1935bp) protein (645aa)
hypothetical protein JPAM2_14006 id=4364586 bin=GWC2_Geobacteraceae_55_20 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
filamentous hemagglutinin
Tax=GWC2_Geobacteraceae_55_20_curated
scn_reactorb_scaffold_43168_77
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92190..92513
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BA0A5
Uncharacterized protein {ECO:0000313|EMBL:GAD22720.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_43168_78
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92790..94598
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
elongation factor 4 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035CF4EB
GTP-binding protein LepA
scn_reactorb_scaffold_43168_79
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94772..95746
DNA (975bp) protein (325aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
signal peptidase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035CF2B0
signal peptidase I
scn_reactorb_scaffold_43168_80
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95763..96128
DNA (366bp) protein (122aa)
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI0002E92ED5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_43168_81
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96129..96812
DNA (684bp) protein (228aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ribonuclease 3 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZC5_9BURK
scn_reactorb_scaffold_43168_82
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96809..97807
DNA (999bp) protein (333aa)
GTPase Era n=2 Tax=Acidovorax RepID=A1WAW4_ACISJ
GTP-binding protein era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_43168_83
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97878..98639
DNA (762bp) protein (254aa)
DNA repair protein RecO n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003775491
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA repair protein RecO
scn_reactorb_scaffold_43168_84
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98636..99406
DNA (771bp) protein (257aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDP2_ACIET
pyridoxine 5'-phosphate synthase
scn_reactorb_scaffold_43168_85
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99465..99857
DNA (393bp) protein (131aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
4''''-phosphopantetheinyl transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E92BA
holo-(acyl-carrier-protein) synthase
scn_reactorb_scaffold_43168_86
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99924..101015
DNA (1092bp) protein (364aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; Beta-hexosaminidase; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
beta-n-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=2 Tax=Acidovorax RepID=A1WAV9_ACISJ
scn_reactorb_scaffold_43168_87
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101462..103765
DNA (2304bp) protein (768aa)
Uncharacterized protein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9R7_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58775.1}; Flags: Precursor; Fragment;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Ig domain-containing protein
scn_reactorb_scaffold_43168_88
unknown

Not on your lists

comp(103947..104864)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036A02F8
scn_reactorb_scaffold_43168_89
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(104861..106573)
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037E95D1
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EHQ06313.1}; Flags: Precursor;; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
scn_reactorb_scaffold_43168_90
unknown

Not on your lists

comp(106570..107631)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000378CC7A
Displaying items 61-90 of 171 in total

View Taxonomy