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scn_reactorb_scaffold_43168_69

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 81936..82568

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D3DBCF related cluster n=1 Tax=unknown RepID=UPI0003D3DBCF similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 210.0
  • Bit_score: 355
  • Evalue 2.50e-95
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 210.0
  • Bit_score: 355
  • Evalue 3.50e-95
RNA polymerase sigma factor rpoe similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 211.0
  • Bit_score: 349
  • Evalue 5.10e-94

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGACAGCTTCCCCCCCCACGCCGGCCAGCCCTGACAGCGATCTGCAATTGGTGGAGCGCACCGTGGCGGGTGACCAGCGGGCTTTCGAGTTGCTGGTGCTGAAGTACCAGCGGCGCATCGAGCGCCTGATCGCGCGCATGGTGCGCGACACCGACCTGGTGCAGGATATCGCCCAGGAAACCTTCATCCGCGCCTACCGGGCGCTGCACCAGTTCCGGGGCGAGGCACAGTTCTACACATGGCTGTACCGCATTGCCGTGAACACGGCCAAGAAGGCCCTGGTGGACCTGCGGCGCAACCCGGTCATCACCGAGAGCGCGCTGCGTGGCGGCAGTGATGATGACGATGAAACTTCCAGCATCGGTGTGGAACTAACCAGCGACGAAACGCCGGAGACGGTGCTGGCAGCCCAGGAAATCGCAGCGGCGGTGAATGCCGCCATGGAGGCCTTGCCCGAGGAATTGCGCCAAGCGGTCACGCTGCGCGAAATCGAGGGCCTGAGCTATGACGAAATCGCCGCCGCGATGGACTGCCCCATTGGAACCGTGCGTTCTCGGATTTTCCGGGCCCGCGAGGCCATTTCGCAACGTGTCAAGCCCTTGCTGGACAAGCAATCCGGCAAGCGCTGGTAG
PROTEIN sequence
Length: 211
MTASPPTPASPDSDLQLVERTVAGDQRAFELLVLKYQRRIERLIARMVRDTDLVQDIAQETFIRAYRALHQFRGEAQFYTWLYRIAVNTAKKALVDLRRNPVITESALRGGSDDDDETSSIGVELTSDETPETVLAAQEIAAAVNAAMEALPEELRQAVTLREIEGLSYDEIAAAMDCPIGTVRSRIFRAREAISQRVKPLLDKQSGKRW*