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scn_reactorb_scaffold_17052

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Displaying items 1-30 of 347 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_17052_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..841
DNA (840bp) protein (280aa)
Aminotransferase class I and II n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJK8_ACIET
succinyldiaminopimelate transaminase
Aminotransferase class I and II {ECO:0000313|EMBL:ACM33346.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_17052_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

851..1675
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=DAPD_ACISJ
Tax=GWA2_Curvibacter_64_110_curated
scn_reactorb_scaffold_17052_3
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1719..2885
DNA (1167bp) protein (389aa)
Twitching motility protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q354_ACIAP
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ADX46638.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_17052_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2905..4092
DNA (1188bp) protein (396aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Succinyl-diaminopimelate desuccinylase n=2 Tax=Alicycliphilus denitrificans RepID=E8U168_ALIDB
succinyl-diaminopimelate desuccinylase
scn_reactorb_scaffold_17052_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4089..5000
DNA (912bp) protein (304aa)
Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=2 Tax=Alicycliphilus denitrificans RepID=E8U167_ALIDB
protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific
Methyltransferase {ECO:0000313|EMBL:GAO23311.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_17052_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5000..6961
DNA (1962bp) protein (654aa)
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U162_ALIDB
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU99999.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_17052_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7258..7995)
DNA (738bp) protein (246aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100) id=12552105 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fabG; 3-ketoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_17052_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8099..9277)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEB84815.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AEB84815.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acetyl-CoA acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GD56_ALIDK
scn_reactorb_scaffold_17052_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9371..11071)
DNA (1701bp) protein (567aa)
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4S2_9BURK
poly(R)-hydroxyalkanoic acid synthase
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:AFU46159.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_17052_10
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11192..11494
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0K8V7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE49990.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scn_reactorb_scaffold_17052_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11414..12235)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW17_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_17052_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12235..12906)
DNA (672bp) protein (224aa)
Maleylacetoacetate isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW16_9BURK
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EHL23395.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
maleylacetoacetate isomerase
scn_reactorb_scaffold_17052_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12903..13334)
DNA (432bp) protein (144aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT91_9BURK
MarR family transcriptional regulator {ECO:0000313|EMBL:KJA08856.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
marR family transcriptional regulator
scn_reactorb_scaffold_17052_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13429..14124
DNA (696bp) protein (232aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQ10_ACIAC
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ABM33048.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scn_reactorb_scaffold_17052_15
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14125..14667)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003794C08
Uncharacterized protein {ECO:0000313|EMBL:KJA10802.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
putative lipoprotein
scn_reactorb_scaffold_17052_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14730..15278
DNA (549bp) protein (183aa)
ADP-ribose pyrophosphatase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003801F25
NUDIX hydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_17052_17
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15275..15802
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U5P2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE51442.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scn_reactorb_scaffold_17052_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15847..17934)
DNA (2088bp) protein (696aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000372DE29
scn_reactorb_scaffold_17052_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17937..18305)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A0657
Lactoylglutathione lyase {ECO:0000313|EMBL:GAD24131.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_17052_20
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18320..19474)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KET1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE49768.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ZipA FtsZ-binding region protein
scn_reactorb_scaffold_17052_21
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19515..23042)
DNA (3528bp) protein (1176aa)
Chromosome partition protein Smc n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIW1_ACIET
chromosome segregation protein smc
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_17052_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23192..26326)
DNA (3135bp) protein (1045aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T452_ACIDE
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM25002.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
diguanylate cyclase/phosphodiesterase
scn_reactorb_scaffold_17052_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26432..27829)
DNA (1398bp) protein (466aa)
D-serine/D-alanine/glycine transporter n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WT05_DELAC
D-serine/D-alanine/glycine transporter {ECO:0000313|EMBL:EPD42898.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
amino acid permease-associated protein
scn_reactorb_scaffold_17052_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28134..28601)
DNA (468bp) protein (156aa)
peroxiredoxin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B018E
Predicted redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:GAD23432.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
OsmC family protein
scn_reactorb_scaffold_17052_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28667..29512)
DNA (846bp) protein (282aa)
multidrug transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003697971
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:GAD23433.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
multidrug transporter
scn_reactorb_scaffold_17052_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29659..30543
DNA (885bp) protein (295aa)
transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380F3B5
Transcriptional regulator {ECO:0000313|EMBL:GAD23435.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
transcriptional regulator
scn_reactorb_scaffold_17052_27
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30545..31177)
DNA (633bp) protein (211aa)
lysine transporter LysE n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI00028968BA
LysE superfamily transporter protein {ECO:0000313|EMBL:AFJ23820.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
lysine transporter LysE
scn_reactorb_scaffold_17052_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31225..32115)
DNA (891bp) protein (297aa)
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRS3_ALIDB
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADV00287.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_17052_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32235..33740
DNA (1506bp) protein (502aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:ABM42185.1}; EC=1.2.1.27 {ECO:0000313|EMBL:ABM42185.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7G0_ACISJ
scn_reactorb_scaffold_17052_30
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33853..35019
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJD0_ACIET
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACM33268.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying items 1-30 of 347 in total

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