ggKbase home page

scn_reactorb_scaffold_8582_58

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 52567..52950

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=22 Tax=Proteobacteria RepID=A6V7M4_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 127.0
  • Bit_score: 218
  • Evalue 2.90e-54
trbC; mating pair formation conjugal transfer TrbC transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 127.0
  • Bit_score: 218
  • Evalue 8.20e-55
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AIJ47716.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 127.0
  • Bit_score: 218
  • Evalue 4.00e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGACACAAATGACCATTCCTGCTTTCCGCTTTTCTGTAAATCCGGCTATGCGCCTTGCGTGGCCGCGCAGCCTGGTCCGCCCTGCGGAGCAAGGACTGCTGCTTACGGCGTTGATGCTGCTGCTCGCCGGCACCGCGCAGGCCGCTGGCTCCAGCATGCCCTGGGAAGCACCGTTGCAATCCATCTTGGAGTCGATCCAGGGGCCGGTGGCCCGGATCGTCGCGGTCATCATCATTATTGCCACGGGTCTGGCGCTGGCCTTCGGAGATACCAGTGGGGGCTTCCGCAAGCTGATCCAGATCGTGTTCGGGCTTTCGATCGCGTTTGCCGCGTCCTCGTTCTTCCTGTCGTTCTTCAGCTTCTCGGGCGGAGCGGTCGTATGA
PROTEIN sequence
Length: 128
MTQMTIPAFRFSVNPAMRLAWPRSLVRPAEQGLLLTALMLLLAGTAQAAGSSMPWEAPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*